Listeria monocytogenes R479a (serotype 1/2a): LMR479A_0171
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Entry
LMR479A_0171 CDS
T03180
Symbol
holB
Name
(GenBank) DNA polymerase III delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lmr
Listeria monocytogenes R479a (serotype 1/2a)
Pathway
lmr03030
DNA replication
lmr03430
Mismatch repair
lmr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMR479A_0171 (holB)
03430 Mismatch repair
LMR479A_0171 (holB)
03440 Homologous recombination
LMR479A_0171 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmr03032
]
LMR479A_0171 (holB)
03400 DNA repair and recombination proteins [BR:
lmr03400
]
LMR479A_0171 (holB)
Enzymes [BR:
lmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMR479A_0171 (holB)
DNA replication proteins [BR:
lmr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMR479A_0171 (holB)
DNA repair and recombination proteins [BR:
lmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMR479A_0171 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
Motif
Other DBs
NCBI-ProteinID:
CDM15396
LinkDB
All DBs
Position
165492..166484
Genome browser
AA seq
330 aa
AA seq
DB search
MGLQDELTMMQPVVMKIFSKSVRENRLSHGYLFEGTRGTGKKRTALWLAQSLFCLESTET
ELACGKCTNCTRIASHNHPDVHLLEPDGASIKIDQVRALKQELSKRGMESDQKVVIIYDA
EKMTVQSANSLLKFIEEPEGGLLLLFLTTNPGQILPTIQSRLQPVTFKSLTFDSLLASLT
AAGISEQKARIYASITGSVEEAKAFEESEWFSEARNVVIKLYEGIHHQGTSPLIIIQESW
MPLFKEKDKMALGLELLLLLYRDRLHLTLDENYEPICTAQKEMLGQDALRKSLSETTGEI
EKILAAKSKLDSNMNTQLLMEQLVLEIQGR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgggattacaggatgaacttacaatgatgcaaccagtggtcatgaagattttttcaaaa
agtgtccgcgaaaatcgattatctcacggctatttattcgaaggaacaaggggtacaggg
aagaagcgcacagcactttggttagctcagagccttttttgtttagaaagcactgaaacc
gagcttgcttgtggaaagtgtaccaattgcacgagaatagcgagtcataatcatccggat
gttcatttgctagagccagatggggctagtattaaaattgatcaggttcgcgcgcttaag
caagaacttagtaaacgtgggatggaatcggatcaaaaagtagttatcatttacgatgca
gaaaaaatgactgttcaatcagccaatagtctgctgaaatttatagaagaaccagaaggc
ggtttgttattattatttttaacaacaaatcccgggcaaattttgccaacaatccagtca
agactgcaacctgtcacattcaaatcactgacttttgatagtttactcgcatcactaaca
gcagcaggcatttccgaacaaaaagcgcggatttatgctagcattactgggagtgtggaa
gaagcgaaggcttttgaagagagtgagtggtttagtgaggcaagaaatgttgtcatcaag
ttatacgaaggaattcaccatcaaggaaccagcccattaattatcattcaagaatcatgg
atgccactttttaaagagaaagataagatggcgcttgggctcgaattgttgttactgctg
taccgcgaccggctacaccttacacttgacgagaactacgaaccaatttgtacagcgcaa
aaagaaatgctcggacaagatgcgctgcgcaagtcactgtccgaaaccacaggggaaatc
gagaagattctcgctgcgaaatcaaaactggattccaatatgaacacgcaacttctaatg
gagcagttagttctggaaattcaagggaggtaa
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