Listeria monocytogenes R479a (serotype 1/2a): LMR479A_0245
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Entry
LMR479A_0245 CDS
T03180
Symbol
clpC
Name
(GenBank) class III stress response-related ATPase, AAA+ superfamily
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lmr
Listeria monocytogenes R479a (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:
lmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lmr03110
]
LMR479A_0245 (clpC)
Chaperones and folding catalysts [BR:
lmr03110
]
Heat shock proteins
HSP100
LMR479A_0245 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
Sigma54_activat
AAA_22
AAA_16
IstB_IS21
nSTAND3
UVR
RuvB_N
AAA_14
AAA_18
ATPase_2
TniB
Zeta_toxin
AAA_28
Mg_chelatase
bpMoxR
AAA_7
Torsin
NACHT
TIP49
AAA_3
NBD_SMAX1
AAA_24
AAA_25
DNA_pol3_delta2
Sigma54_activ_2
MazE_antitoxin
Motif
Other DBs
NCBI-ProteinID:
CDM15467
LinkDB
All DBs
Position
247191..249653
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AA seq
820 aa
AA seq
DB search
MMFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKV
QQEVEGLIGHGEKAVTTIQYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVA
ARVLSNLGISLNKARQQVLQLLGGGDATGAGRQTNTQATPTLDSLARDLTVIAREDNLDP
VIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMT
LDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILK
PPLARGELQCIGATTLDEYRKYIEKDAALERRFQPIKVDEPTVEESIQILHGLRDRYEAH
HRVAITDEALEAAVRLSDRYISDRFLPDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLS
DLKKEKDAAVQGQEFEKAASLRDKEQKLKKSLEETKANWQEKQGLDHSEVTEDIVAEVVA
SWTGIPVAKLAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSF
IFLGPTGVGKTELARALAESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQ
LTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIG
AQEMKQDKSMGFNVTDPLKDHKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQ
IVTLLTAQLTKRLAERDIHVKLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEEL
LRGNIKVGDYVEIGVKDGKLEVRKKDAPKKKTTSKKVKAK
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttggacgatttacgcaaagagctcagaaagtactcgcgttgtcacaagaagag
gcgatgcgtttgaatcatagtaatttaggaacagaacatattttattagggcttgtaaga
gaaggcgaaggaattgcggcgaaagctctctatgaactgggaattagttctgaaaaagtg
cagcaagaggtagagggattaattgggcatggggaaaaagctgtgacgacgatccaatat
acacctcgtgcgaaaaaagtaattgaactttccatggatgaggctcgtaaattaggccat
acttacgttgggacagaacatatcttacttgggcttattcgtgaaggcgaaggagttgcg
gcacgcgttttaagtaatcttggtattagtttgaataaagctcggcagcaagttctacag
ctcttaggcggcggtgatgctactggggcggggagacaaacaaatacgcaagctacaccg
actttagatagtttggcacgtgacttaacggttattgctcgggaagataatttggatccg
gttattggtcgttctaaagaaatccaacgtgtgattgaagtacttagtcgccggacgaaa
aataacccggtactcattggggaacctggtgtcggtaaaacagcgattgctgaaggctta
gcgcaacaaattgttcgtaatgaagtacctgagaccttacgtggaaaacgtgtaatgaca
ttggatatgggaactgttgtggcaggtacaaaatatcgtggtgaattcgaagaccgtttg
aagaaagtaatggatgaaattcgtcaagctgggaatgttattctatttatcgatgaattg
catacgttaatcggtgcaggtggggcggaaggtgcgattgatgcatcgaatatcttgaag
ccgcctctagctcgtggagagttgcaatgtattggggcaacaacgctcgacgagtaccgt
aaatatattgaaaaagatgctgcgcttgagagacgtttccaaccgattaaagtagacgaa
ccaactgtagaagaatctattcaaattttacatggattgcgtgatcgttatgaagcgcat
caccgagttgcaattacggatgaagcacttgaggccgctgttcgtttatctgatcgctat
atttcagaccgtttcttacctgataaagcgattgatgttatcgatgaatctggttctaaa
gtacgtttgaaatcttttacaacgccaaaaaatgtaaaagaaatggaaaataatttatcc
gatttgaaaaaagaaaaagatgcggctgttcaaggtcaagaatttgaaaaagcagcgtca
ttacgtgataaagaacaaaaactcaaaaaatcattagaagaaactaaagcgaattggcaa
gaaaaacaagggcttgaccatagtgaagtaacagaagatattgtcgctgaagtggttgct
agttggactgggattccagttgcgaaacttgcggaaacagagacaaataaactgttaaat
atggaaaaacttttacatgaacgtgtgattggacaagatgcagcggttaaagctgtatcg
ctagctgtacgtcgagctcgtgcaggccttaaagatccgaaacgtccgattggttccttt
attttccttggacctactggtgttgggaaaacagaacttgcgcgtgcacttgctgagtcg
atgtttggcgatgaggattcgatgattcggattgatatgtctgagtacatggagaaattt
tcaactgctcgtttagttggggctcctccaggttatgtaggatacgaagaaggtggacag
ctgacagaaaaagttcggcaaaaaccttattcagtagtccttttagatgaaattgaaaaa
gcacatccggatgtatttaatatgttgctacaagtactggatgatggacgtttgactgat
tctaaagggcgagtagttgattttagaaatacagttatcattatgacttccaatattgga
gctcaagaaatgaaacaagataaatcaatgggctttaatgttactgatccacttaaagac
cataaagcgatggagcaccgcgttttacaagatttaaaacaggcgttccgaccagaattt
atcaaccgaattgatgaaacaattgtattccattcgctgcaagaaaaagaattgaaacaa
attgttactttactaactgctcaattaacaaaacgcttagccgaacgcgatattcacgtg
aaattaactgaaggtgcgaaatccaaaatcgctaaagatggctacgatccagagtacgga
gctcgtcctttaaaacgggctattcaaaaagaagtggaagacatgctttctgaagaattg
cttcgtggtaacattaaagtaggcgattacgttgaaattggtgtgaaagatggcaagtta
gaggttagaaaaaaagatgctcctaaaaagaaaacaacctctaaaaaagtaaaagctaaa
taa
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