Listeria monocytogenes R479a (serotype 1/2a): LMR479A_1083
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Entry
LMR479A_1083 CDS
T03180
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
lmr
Listeria monocytogenes R479a (serotype 1/2a)
Pathway
lmr00010
Glycolysis / Gluconeogenesis
lmr00020
Citrate cycle (TCA cycle)
lmr00260
Glycine, serine and threonine metabolism
lmr00280
Valine, leucine and isoleucine degradation
lmr00310
Lysine degradation
lmr00380
Tryptophan metabolism
lmr00620
Pyruvate metabolism
lmr00630
Glyoxylate and dicarboxylate metabolism
lmr00640
Propanoate metabolism
lmr00670
One carbon pool by folate
lmr00785
Lipoic acid metabolism
lmr01100
Metabolic pathways
lmr01110
Biosynthesis of secondary metabolites
lmr01120
Microbial metabolism in diverse environments
lmr01200
Carbon metabolism
lmr01210
2-Oxocarboxylic acid metabolism
lmr01240
Biosynthesis of cofactors
Module
lmr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
lmr_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
lmr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LMR479A_1083 (pdhD)
00020 Citrate cycle (TCA cycle)
LMR479A_1083 (pdhD)
00620 Pyruvate metabolism
LMR479A_1083 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
LMR479A_1083 (pdhD)
00640 Propanoate metabolism
LMR479A_1083 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LMR479A_1083 (pdhD)
00280 Valine, leucine and isoleucine degradation
LMR479A_1083 (pdhD)
00310 Lysine degradation
LMR479A_1083 (pdhD)
00380 Tryptophan metabolism
LMR479A_1083 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LMR479A_1083 (pdhD)
00670 One carbon pool by folate
LMR479A_1083 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmr04147
]
LMR479A_1083 (pdhD)
Enzymes [BR:
lmr01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
LMR479A_1083 (pdhD)
Exosome [BR:
lmr04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
LMR479A_1083 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
FAD_oxidored
FAD_binding_2
HI0933_like
AlaDh_PNT_C
NAD_binding_8
Thi4
3HCDH_N
UDPG_MGDP_dh_N
DAO
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
CDM16305
LinkDB
All DBs
Position
1061187..1062590
Genome browser
AA seq
467 aa
AA seq
DB search
MVVGDFPEERDTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALIT
IGHRFKEAGHSDNMGITADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAF
FVDDHSLRVIHPDSAQTYTFNNVIIATGSRPIEIPGFKYGKRVLSSTGALALTEVPKKLV
VIGGGYIGTELGGAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALA
KSAEETENGVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDK
QGRSNVSNIFAIGDIVPGVPLAHKASYEAKIAAEAIAGEKSENDYTALPAVVFSDPELAT
VGLTEKEAKEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNAS
DIISEIGLAIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggtagtaggcgattttccagaagaaagagacaccatagtcatcggtgcaggcccaggt
gggtatgtagccgcaatccgagctgcacaactcggacaaaaagttaccattattgaaaaa
gaatattacggcggtgtgtgcttaaacgtgggatgtattccttccaaagcacttatcaca
atcggtcaccgttttaaagaagctggacactctgataacatgggtattacagcggacaac
gtgaacttagatttcacaaaagcacaagaatggaaaggcggcgtagttaacaagcttaca
tcaggtgttaaaggccttcttaagaaaaataaagtagaaatgttagaaggagaagcgttc
ttcgtggatgatcattccttacgtgtgattcaccctgattccgctcaaacttatacattc
aataacgttatcattgcaacaggatctcgtccaatcgaaatcccaggtttcaaatatggt
aaacgtgtattaagctcaactggtgcacttgcactaacagaagttccgaaaaaattagtc
gtaattggcggcggatatatcggaacagaactaggtggagcattcgctaaccttggtaca
gaactaactatccttgagggtggtccagaaatcttaccaacatacgaaaaagacatggtt
tccctagttaaacgtaatctgaaaagcaaaaacgttgaaatggttactaaagcacttgca
aaatctgctgaagaaactgaaaacggcgttaaagtaacgtatgaagctaacggtgaaaca
aaaactatcgaagctgattatgttttagtaacagtaggtcgtcgtccaaatacagacgaa
atcggtttagaacaagctggcgttaaagtaacagaacgcggtttagtagaagttgataaa
caaggtcgctcgaacgtttctaatattttcgcaattggtgacatcgttcctggtgttcct
ctagctcacaaagctagctatgaagcaaaaatcgctgctgaagcaattgctggcgaaaaa
tccgaaaacgattatacagcacttccagctgtcgttttcagtgatccagaacttgctaca
gttggtttaacagaaaaagaagcaaaagaaaaaggctttgatgtaaaagctgctaaattc
ccattcggcggtaacggtcgtgcgctttccttagatgcacctgaaggatttgttcgtcta
gttactcgtaaagaagatggcctagttatcggcgcacaagttgccggaatgaacgcttct
gatattatttcagaaatcggcttagcaatcgaatcaggcattacagcagaagacatcgcg
cttactatccacgctcacccatcactaggagagcttacaatggaagcagccgaacttgct
ttaggtcgcccaattcatatgtaa
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