Listeria monocytogenes R479a (serotype 1/2a): LMR479A_1620
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Entry
LMR479A_1620 CDS
T03180
Symbol
secDF
Name
(GenBank) protein-export membrane protein
KO
K12257
SecD/SecF fusion protein
Organism
lmr
Listeria monocytogenes R479a (serotype 1/2a)
Pathway
lmr02024
Quorum sensing
lmr03060
Protein export
lmr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LMR479A_1620 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LMR479A_1620 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LMR479A_1620 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lmr02044
]
LMR479A_1620 (secDF)
Secretion system [BR:
lmr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LMR479A_1620 (secDF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecD_1st
SecDF_P1_head
Sec_GG
MMPL
NfeD_membrane
DUF7472
Ig-like_IP5PC_F
Motif
Other DBs
NCBI-ProteinID:
CDM16842
LinkDB
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Position
complement(1571968..1574232)
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AA seq
754 aa
AA seq
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MVKKSKIVIFFLVVAIIFGAVFGTAKMVMQNINLGLDLQGGFEVLYEVSPADGKGTVSKQ
TLTDTVTSLDKRVNSLGVAEPSIQIEGNNRIRVQLAGVTDQAEARKMLSTTAQLSFRDAN
DKMMMNGSDLVAGGAKQAFDSSNNPIVTLKLKSADKFASVTKTILAEAPDNQLVIWLDWK
EGQKYKTEREKKDPAYLSAPNVSSVLDTDKVEISGSFTTEEAKDLAELLNSGALPVKMKE
VYSTSVGAQFGQDALQETILAGIIGVIAIFIFMMAVYRLPGVIACITLVAYTYLVLLILS
LLNATLTLPGIAGLILGIGMAVDANVITYERIKEEIKVGRSTKAAFEVGGKEAFRAILDG
NLTTLIVAAVLFYFGTSSIKGFATVLIISILVSFLTAVWGSRFLLGLLVKSNWLNNKPGF
FAVKRKDIHNLHEGINSFSLKTHFDRFDFVKHHRLFLSIFAVIVIVGIVILSIFKLNLGI
DFASGTRAEVTANQTLTETQIKKDLDAIDMPSDDIVFQGSGSKTAVVSYKGTLSQNDVAK
FKNYFEDKYKHEPSISTVSPTVGKELAKNGFWALGVASVLIVLYIAVRFEFYMGIAAILS
LLFDAFIIFIFFSVTRLEVDLTFIAAVLTVIGYSINDTIVTADRIRDISMKMQRFKTKEE
IADAVNKALRQTFTRSINTILTVIFTVLALVLFGSESILNFSIALLVGLVSSVFSSIFMA
MQLWYVFKARQLRKKGPISTVKKKKPRNNGQPVV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaaagagtaagatagttattttctttctagtagttgcaattatctttggtgct
gtatttggtaccgcaaaaatggttatgcaaaacatcaacttaggcttggatcttcaaggg
ggattcgaagttctatatgaagtgtcaccagctgacggcaaagggactgtgtcgaaacaa
acgttgacagatacagtaacttcactcgataagcgtgttaattcattaggtgtagctgaa
ccgagtattcaaatcgaaggaaataaccgtatccgtgttcaacttgctggagtaactgac
caagcagaagcacgtaaaatgctatcgaccacagcccaattatcatttagagatgcaaat
gacaaaatgatgatgaatggtagtgacttggttgcaggcggtgctaaacaagcttttgat
tcaagcaataatccaatcgttacattaaaactaaaaagcgcagacaaatttgctagtgta
acaaaaacaatactagcagaagcgcctgacaatcaattagttatttggttagattggaaa
gaaggacaaaagtacaaaacagaacgcgaaaagaaagacccggcttacttatcagcacca
aacgtaagtagcgtattagatacagataaagtagagatttccggaagcttcacaacggaa
gaagcaaaagatttagctgaattgctaaactctggggcacttcctgtgaaaatgaaagag
gtttactctacatctgttggcgctcaatttggtcaagatgcattacaagaaactatttta
gctggtattattggggttattgctatctttattttcatgatggctgtttaccgtttacca
ggtgttattgcttgtatcactttagttgcatacacttatttagtactattaatactgagt
ctgcttaacgcaacacttactttaccagggattgcaggtttgattctggggataggtatg
gctgttgacgcgaacgtaataacctacgagcggataaaagaagaaatcaaagtcggtagg
tcgacgaaagcggcttttgaggtcggcggtaaagaagcattccgtgcgattttagatggt
aatttgacgacacttatcgtagctgcggttctcttctactttggaacaagctccatcaaa
ggttttgctacagtactaatcattagtattttagttagcttcttgacagccgtttgggga
tcaagattcttattaggcttattagtgaaaagtaattggcttaacaataaaccaggattc
tttgcggttaaacgaaaagatatccataatttacatgagggcattaatagctttagctta
aaaacacactttgaccgttttgactttgtaaaacatcatcgtctgttcttatctattttt
gctgtgattgttattgtcggtattgttattctatcgatcttcaaactaaatctaggtatt
gactttgccagtgggacacgagcggaagtaacagctaatcaaacactgacagaaacgcaa
attaagaaagatttagatgcgattgacatgccatcggatgatattgttttccaaggatct
ggttctaaaacagccgttgtttcttataaagggacattatcacaaaatgatgtagctaaa
ttcaaaaactactttgaggacaaatataagcacgaaccaagcattagtaccgtttcacca
actgtcggtaaagaacttgccaaaaatggcttctgggcactcggtgtggcgtctgtgttg
attgtactttatattgcggtccgatttgaattttatatgggtattgcggcgattctttcc
ttactattcgacgcatttatcatctttatctttttcagtgtaacaaggctggaggttgac
ttaaccttcattgccgcggtgctgacggttatcggttattccattaatgacacgatagtc
accgccgaccggatacgggatattagtatgaagatgcaacgtttcaaaacgaaagaagaa
attgcggatgctgttaataaagcattacgtcaaacattcactcgttcgattaataccatt
ttaacggttattttcaccgtacttgcacttgtactatttggtagtgagtctattctgaac
ttctccatcgccttacttgttggacttgtttctagtgtattctcctccatctttatggcg
atgcaattatggtacgtatttaaagcaagacaacttcgtaaaaaaggaccaattagcaca
gttaaaaagaaaaaaccacgtaataacggacaacctgtcgtataa
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