Listeria monocytogenes R479a (serotype 1/2a): LMR479A_2212
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Entry
LMR479A_2212 CDS
T03180
Symbol
pdxS
Name
(GenBank) glutamine amidotransferase for pyridoxal phosphate synthesis
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
lmr
Listeria monocytogenes R479a (serotype 1/2a)
Pathway
lmr00750
Vitamin B6 metabolism
lmr01100
Metabolic pathways
lmr01240
Biosynthesis of cofactors
Module
lmr_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
lmr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
LMR479A_2212 (pdxS)
Enzymes [BR:
lmr01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
LMR479A_2212 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
NanE
His_biosynth
DUF561
IGPS
NMO
IMPDH
FMN_dh
TMP-TENI
TetR_C_27
DUF188
Motif
Other DBs
NCBI-ProteinID:
CDM17428
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All DBs
Position
2187250..2188137
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AA seq
295 aa
AA seq
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MEKKVGTDRVKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVA
RMADPRIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKS
DFTVPFVCGCRDIGEALRRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNGQIRQIAGMTD
DELMVAAKNFGAPYELIKEIKTLGKLPVVNFAAGGVATPADAALMMELGADGVFVGSGIF
KSDNPAKFASAIVQATTYYTDYELIGKLSKELGSPMKGIEMSRLNPEDRMQDRSI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaagttggtacagatcgtgtaaaacgtggtatggcacaaatgcaaaaaggc
ggcgtcattatggacgttgttaatgctgaacaagcaaaaatcgctgaagaagctggtgct
gttgcagttatggcgcttgaacgggttccttccgatattcgtgcagctgggggtgtcgct
cgtatggccgatcctcgtattgtcgaagaagtaatgaatgctgtttctatccccgtaatg
gcaaaagcacgtattggtcatattacagaagctcgcgtccttgaagcaatgggtgttgat
tatattgacgaaagtgaagtattaacgccagccgatgatgaattccatttattaaaatca
gatttcactgtcccattcgtgtgtggttgtcgtgatattggtgaagcactccgccgtatt
ggtgaaggtgctgccatgctccgtacaaaaggagaacctggaacaggcaatatcgtcgaa
gcagtccgtcacatgcgccaagtaaacggccaaatccgccaaatcgcaggcatgacagat
gatgaattaatggttgctgctaaaaacttcggtgctccatatgaattaatcaaagaaatt
aaaacacttggcaaacttccggtcgttaattttgccgctggtggcgttgcgactcccgct
gatgctgcactaatgatggaacttggagcagacggtgttttcgttggatcaggtattttc
aaatctgataatccagcaaaattcgccagcgccatagtccaagccactacttactatact
gactatgaattaatcggaaaactgtccaaagagctaggttccccgatgaaaggaatcgaa
atgtctcgccttaatccagaagacagaatgcaagatcggagtatttaa
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