Listeria monocytogenes R479a (serotype 1/2a): LMR479A_2334
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Entry
LMR479A_2334 CDS
T03180
Symbol
yhaM
Name
(GenBank) 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lmr
Listeria monocytogenes R479a (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:
lmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmr03019
]
LMR479A_2334 (yhaM)
Messenger RNA biogenesis [BR:
lmr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LMR479A_2334 (yhaM)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
CDM17550
LinkDB
All DBs
Position
complement(2313645..2314631)
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AA seq
328 aa
AA seq
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MGGETSYYRKKEGDKMEKRLLDFEVGETVDLFLLIKSSVKGTASNGKPFLSLVLQDKSGE
LEAKLWDVKESDEANYGVQQIVHLMGDIQNYRGRKQLKIRQIRQATALDGVSASEFMETA
PINKEEMADEITQYIFEMKNANLQRITRALLKKYQDDFYDYPAAMRHHHEFVSGLSFHVV
SMLRLAKSVADLYPSVNRDLLYAGVILHDLGKVIELSGPVSTTYTLEGNLIGHISIVVEE
VSKIADELSIDGEEVVVLKHVLLSHHGKGEWGSPKPPLVREAEILHQIDLMDASLNMMDK
VLKHTKPGEFSERVFGLDNRSFYNPTFE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgggtggagaaacttcttactacagaaagaaagaaggcgataaaatggaaaaaagatta
ttagattttgaagttggagaaacagtagacctattcttgctaattaaatcaagtgtaaaa
ggaacggctagcaacggaaagccattcttgagtcttgttttacaagataaatcgggtgaa
ttagaagcaaaactatgggatgttaaagaaagtgatgaagcgaattacggggtacaacaa
atagttcaccttatgggtgatattcaaaattatcgtggtcgaaaacaattgaaaatccgc
caaattaggcaagctacagcactggacggtgttagtgctagtgaatttatggaaaccgcg
ccaattaataaagaagaaatggccgatgaaatcacacaatatattttcgaaatgaaaaat
gcgaatttgcaacgaattacgcgcgcattgcttaaaaaatatcaagatgatttttatgat
tatccggcggcaatgcgtcatcatcatgaatttgtttccggtttgagttttcatgtagtt
tcgatgttacgacttgcaaaatcagttgccgatctttacccatctgttaatcgagactta
ttatacgcaggtgtgattttacatgatttaggaaaagtcattgaactttcaggcccagta
tcaacgacgtatacactagaaggtaatttaattggccatatttccatcgtagtagaagag
gtgagcaaaattgctgacgaactttcgattgatggtgaagaagtcgtggttttaaaacac
gttcttctatctcatcatggtaaaggtgagtgggggagtccaaaaccaccgcttgtgcgt
gaagccgagattttacaccaaattgatttaatggacgcttccttgaacatgatggataaa
gtactaaaacatacaaaaccgggcgaattcagtgaacgagtatttggattagataatcgt
tcgttttataatcctacatttgaataa
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