Listeria monocytogenes R479a (serotype 1/2a): LMR479A_2715
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Entry
LMR479A_2715 CDS
T03180
Symbol
yrhE
Name
(GenBank) putative oxido-reductase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
lmr
Listeria monocytogenes R479a (serotype 1/2a)
Pathway
lmr00630
Glyoxylate and dicarboxylate metabolism
lmr00680
Methane metabolism
lmr01100
Metabolic pathways
lmr01120
Microbial metabolism in diverse environments
lmr01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
lmr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LMR479A_2715 (yrhE)
09102 Energy metabolism
00680 Methane metabolism
LMR479A_2715 (yrhE)
Enzymes [BR:
lmr01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
LMR479A_2715 (yrhE)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
NADH-G_4Fe-4S_3
Fer4
Fer4_2
Fer4_6
Fer4_8
Fer4_7
Fer4_21
Fer4_10
Fer4_17
Fer4_9
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
CDM17930
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All DBs
Position
complement(2667253..2670240)
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AA seq
995 aa
AA seq
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MGAKVSVQINGVARDVVEGTRMLDYLNAEGIQHPHICYSEQIGPIQSCDTCMCEVDGELM
RACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNNNGNCKVHNTTELLGV
EKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNETLSIDWERSQPRVIW
DDDRPANLSSCVSCGLCATVCPCNALMEKSMLGQAGFMTGLDEDMLEPMIDMVKKVEPNY
QTVFAVSEMEAAMRETRTKKTKTVCTFCGVGCTFEVWTKDRKILKVEPTGEGPVNKFATC
VKGKFGWDFVNSEKRITTPLIRESNEFVPASWEDAIHLVATKLREIQAKYGNDSLGFISS
SKTTNEENYLMQKLARQVFETNNIDNCSRYCQAPASDGLTRTVGIGADSGTVEDIESAGL
VIIVGASPADGHPVLASRIKRAQKTRGQKLIVSDLRKHEMAERSDLFIHPKQGTDFVWLT
AVAKYMIDQGWHDEVFMENRISNVADYLAFLEPFTLEYAEKETGLSVETLKKVAQMVHEA
DGTAVCWGMGVTQNIAGSHTSSAIANLLLVTGNFGRHGAGAYPLRGHNNVQGACDMGSLP
NVLPGIQPLGNDEVRARFEEAYGVSISPEPGLKNNEMLDAIEAGTLHSMYVIGEEMAWVD
SNSNHVQEILASLDFFVVQDVFLSKTAQFADVVFPAAPSLEKEGTFTNTERRVQRLYEVL
EPLGDSKPDWWIIQEVARACGRTDWNYDHPSEIMDEIASLAPFFAGVRYDRMQGFNSLVW
PVSADGKDMPLLYEERFNFPDGKAQFSTLPYIAPITFPEEYNLTLNNGRLLEQFHEGNLT
DKSKGLDYKLPEVFVEVSHELAKERDLESGSLVRLSSPYGRIKLRAVVTDRMKGNEVYVP
MHSVSSETAVNLLTSSAGDVRTKTPAYKQTKVNLTVLEKTGKNPLPDHNPRNRKRFPQNG
AEVARKWSREDYQPISKVNCACGGNCGCGGKGRNH
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcaaaagtatcggtgcaaattaatggcgtggcgcgggatgtggtggaaggaacg
cgaatgctggactatttaaatgcagaaggaatacagcatccgcatatttgttatagtgag
caaattgggccaattcaatcttgtgatacgtgtatgtgcgaggttgatggggagcttatg
cgggcgtgcagcacgaatctaacagacgggatggaaattaaaacaaactcagaactagcg
aaagacgcacaattagaggcaatggaccggattttggaaaatcatttattgtattgtacg
gtttgtgataataacaatggtaactgcaaagtacataatacgacagaacttcttggtgtg
gaaaaacaagaacgtccttaccgcgaaaagggatatttgaatgatttttcgcatccgttt
tatcgttatgatccggatcaatgtattctttgtggacgttgtgtggaggcgtgtcagcaa
gtacaggtgaatgagacgctttcgattgattgggaacgtagtcagccgcgggttatttgg
gatgatgatcgtccggcgaatttatcgtcatgtgtttcttgtgggctgtgtgcgacggtg
tgtccttgtaatgcgctgatggaaaaatcgatgcttggccaagctggctttatgactggc
ttagacgaagatatgctagaaccgatgattgatatggtgaaaaaagtcgagccgaattat
caaaccgtttttgctgtgtcggaaatggaagcagcgatgcgggaaacacggacgaagaaa
acgaagacagtttgtactttttgcggggttggttgtacgtttgaggtgtggacgaaggat
cgtaaaattttgaaagtcgagccaaccggggaaggtcctgtgaacaaatttgccacatgt
gtaaaagggaaatttggttgggattttgtcaatagtgagaaacggattacgacgccgctc
attcgcgagagtaatgaatttgtgccggcgagctgggaagatgcgattcacctagttgcg
accaaactgcgagaaattcaggctaaatacggcaatgactcacttggatttattagttca
tctaagacaacgaatgaagagaactatttgatgcaaaaattggctcggcaggtttttgaa
acgaataatattgataattgttcacgttattgtcaggcgccggcttcggatggactgact
cggacggttggtattggtgcagattcagggactgtggaagatatcgaatctgcggggctt
gttattattgttggtgcatcaccagccgatgggcatccagtccttgctagcagaatcaag
cgagctcagaagacacgcggtcaaaaactaattgtttctgatttacgaaaacacgaaatg
gcagagcgttctgatttattcatacatccaaaacaaggaacagactttgtttggttaaca
gcggttgcgaaatatatgattgatcaaggatggcacgatgaagtctttatggaaaatagg
attagcaatgtggcagattatctagcatttttagaaccatttacattggaatatgcggaa
aaagaaacaggattatcagtagaaacgttgaaaaaagtggcgcagatggttcatgaagca
gacgggacagcggtttgttggggaatgggcgttacgcaaaatattgcgggatcgcacaca
tcttcggctattgccaatttgcttcttgtcactgggaactttggcagacacggggcaggt
gcatatccgcttagagggcataataatgtacaaggcgcttgcgatatgggctcactacca
aatgttctaccaggaattcagccacttggaaatgatgaagttcgcgctcgttttgaagaa
gcttatggcgtgtcgatttcaccagaaccagggctaaaaaacaatgaaatgcttgatgct
attgaggcaggaacgctacattctatgtatgtgattggtgaggaaatggcttgggtggat
tctaattcgaaccatgtgcaagaaatcctcgctagccttgatttctttgtggttcaagat
gtatttttatcaaaaacggcgcagtttgctgatgttgttttcccggcagcgccttcgctt
gaaaaagaaggaacatttaccaatacagagcgccgtgtacaacgactttatgaggtgtta
gagccgcttggagattcaaagccagactggtggattattcaagaggtggctagagcatgc
ggaagaacggactggaattatgatcatccgagcgagattatggatgaaattgctagcttg
gcaccattttttgcaggggttcgttatgaccggatgcaaggatttaacagccttgtgtgg
ccagtgagcgcggatggaaaggatatgccgttactttatgaagaacgatttaattttccg
gacggcaaagcgcaattttcgacgttaccgtatattgcaccgattactttcccggaagaa
tataatttaacactgaataatgggcgtttgctggagcagttccatgaggggaatttgaca
gataagtcgaaagggctggattataaattaccggaagtgtttgtagaagtatcgcatgag
ttagcgaaagaacgcgatttggaaagtggttcgctcgttcgtctaagttcaccgtatggt
cgcattaagcttcgtgctgtggtgactgataggatgaaaggaaatgaagtttatgtgcca
atgcattctgtgagtagcgaaactgcagtcaatttgctgacttcaagtgcgggagatgtt
cggacgaaaacaccggcctataaacaaacaaaagtaaatctaactgtgcttgaaaaaact
gggaaaaatccacttcctgaccacaatccgcgtaatcgtaaaagattcccgcaaaatggg
gctgaagtagcgcgcaaatggtcgagagaagattatcaaccgatttctaaagtgaactgc
gcctgtggtggtaactgtggatgcggcgggaaagggaggaatcactga
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