| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase, beta subunit
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| KO |
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| Organism |
lms Listeria monocytogenes Finland 1998
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:lms00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMLG_0796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:lms03021]
LMLG_0796
03400 DNA repair and recombination proteins [BR:lms03400]
LMLG_0796
Enzymes [BR:lms01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LMLG_0796
Transcription machinery [BR:lms03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LMLG_0796
DNA repair and recombination proteins [BR:lms03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LMLG_0796
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
282476..286030
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| AA seq |
1184 aa
MSGHSGHDVKYGRHRTRRSFARISEVLELPNLIEIQTASYQWFLDEGLREMFRDISPIED
FAGNLSLEFIDYDLGEPKYSVEESKNRDANYAAPLRVKLRLINKETGEVKDQEVFMGDFP
LMTEMGTFIINGAERVIVSQLVRSPGVYFNGKLDKNGKKGFGSTVIPNRGAWLEYETDAK
DVVHVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDNDYLRNTLEKDNTDNAEKALLEIY
ERLRPGEPPTVDNARSLLVSRFFDPKRYDLASVGRYKINKKLHLKNRLFNQTLAETLVDP
ETGEIIASKGDILDRRNLDQIIPNLENGVGFRTLRPTDGVMEDSVLVQSIKIYAPNDEEK
EINIIGNAYIEENVKHITPSDIISSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQ
FRIGLSRMERVVRERMSIQDMTTITPQQLINIRPVVASIKEFFGSSQLSQFMDQTNPLGE
LTHKRRLSALGPGGLTRERAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNK
FGFIETPYRRVDPETNRVTDKIDYLTADEEDNYVVAQANSKLDEQGTFTEEEVMARFRSE
NLAVEKERIDYMDVSPKQVVSVATACIPFLENDDSNRALMGANMQRQAVPLMHPEAPFVG
TGMEHVSAKDSGAAVTAKHDGIVEHVEAREIWVRRVSLVDGKEVTGGIDKYTLRKFVRSN
QGTCYNQRPNVAEGDRVVKGEILGNGPSMDSGELALGRNVLVAFMTWDGYNYEDAIIMSE
RLVKDDVYTSIHIEEFESEARDTKLGPEEMTRDIPNVGEDALRDLDERGIIRVGAEVKDN
DLLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKIFTREAGD
ELPPGVNQLVRVYIVQKRKIHEGDKMAGRHGNKGVISRILPEEDMPFMPDGTPVDIMLNP
LGVPSRMNIGQVLELHLGMAARALGIHVATPVFDGANEEDVWSTVEEAGMARDAKTILYD
GRSGEAFDNRISVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEILTIKSDDVVGRVKTYEAIVKGESVPEPGVPESFKVLIKELQSLG
MDVKMLSADEEEIEMRDMDDDDFTNQNDAFNIVQPENAAAEKTE |
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| NT seq |
3555 nt +upstreamnt +downstreamnt
ttgtcaggacattcaggacatgatgtaaaatatggacggcatcgtacgcgtagaagtttt
gcgcgaatcagtgaagtacttgaattaccaaacttaattgagattcaaacagcttcttac
caatggttcttagatgaagggctacgtgagatgttccgcgatatttcgccaattgaggat
tttgcgggtaatttatctttagaattcattgattacgatcttggagagccaaaatattcg
gtagaagaatctaagaaccgtgatgcaaactatgcggctccactgcgcgtgaagttgcgc
ctaatcaacaaagaaaccggcgaagtaaaagaccaagaagtatttatgggtgatttccca
ctaatgactgaaatgggtacgttcattattaatggggcagaacgtgttatcgtttcccag
ttagttcgttctccaggtgtttacttcaatggaaaactagacaaaaatggtaaaaaaggc
tttggttctactgtcatccctaaccgtggggcttggcttgagtatgaaacagatgctaaa
gacgttgtacacgttcgtattgaccgtacacgtaaattaccagtaactgttttacttcgt
gcactaggctttggttccgatcaagaaattattgatttaatcggggacaatgactacttg
cgcaacacgcttgaaaaagacaacactgacaatgctgaaaaagcacttctagaaatttac
gaaagattacgtccgggtgaacccccaacagttgataacgctagaagcttactagtttct
cgtttctttgatccaaaacgctacgatcttgcaagcgttggacgttataaaatcaacaaa
aaattacatctaaaaaaccgtctattcaaccaaacattagcagaaactttagtggatcca
gaaactggtgaaattatcgcttctaaaggtgacatattggatcgtcgtaatttagatcaa
attattcctaatttagaaaacggtgtaggtttccgcacacttcgtccaactgatggagtg
atggaagatagcgtactcgttcaatctattaaaatttacgcaccaaatgatgaagaaaaa
gaaatcaacatcatcggtaacgcgtatatcgaagaaaacgtaaaacacatcacgccttct
gatattatttcatccattagctacttctttaacttgctacatggtgttggcgatacagat
gacatcgatcacctaggtaatcgtcgtcttcgttctgttggtgaacttttacaaaaccaa
ttccgtatcggtttatctcgtatggaacgtgtggttcgtgaacgtatgtctattcaagat
atgactacaattacaccacaacaattgattaatattcgtccagtagttgcatctatcaaa
gaattctttggtagctcgcagttatctcagttcatggatcaaacaaatccacttggcgaa
cttacgcataaacgtcgtctttcagcgcttggacctggtggtttgacgcgtgaacgtgct
ggttatgaagtacgtgacgtgcattactctcactatggccgtatgtgtccgattgaaacg
ccagagggaccaaacattggtttgattaactccctttcttctttcgcaaaagtaaataaa
ttcggctttatcgaaacgccttaccgccgcgtagatcctgaaacaaaccgtgttacagat
aagattgattatctaactgcggatgaagaggataattacgtagtagcgcaagcgaactcg
aaattagacgaacaaggtactttcacagaagaagaagttatggctcgtttccgttcagaa
aacttagcggtagaaaaagaacgtattgactacatggacgtatcgcctaaacaggttgta
tctgttgcgacagcatgtattccgttccttgaaaacgatgatagtaaccgtgcgctaatg
ggagcgaacatgcaacgtcaagcagtacctcttatgcaccctgaagctccatttgttgga
acaggtatggaacacgtatctgcgaaagactctggtgctgctgtaactgccaaacatgac
ggtattgtagaacacgttgaagctcgcgaaatctgggttcgtcgtgtatctctagtggat
ggcaaagaagtaactggcggaatcgataaatatactttacgtaaatttgttcgttctaac
caagggacttgttataaccaacgtccaaacgtagcagaaggagaccgcgttgttaaagga
gaaatccttggtaacggtccatctatggattccggtgaacttgcacttggtcgtaacgta
ctagttgcgttcatgacttgggatggttataactacgaggatgcgatcatcatgagtgaa
cgtcttgtaaaagatgacgtttatacttcgattcatattgaagaatttgaatcagaagct
cgtgatacaaaactcggacctgaagaaatgactcgtgatattccaaatgttggggaagac
gctttacgtgaccttgacgaacgtggaattatccgtgttggtgcggaagtaaaagacaac
gaccttctagttggtaaagtaacaccaaaaggagttactgaattaactgcagaagaacgt
ttattacacgctatctttggtgaaaaagcacgtgaagttcgtgatacttcattacgtgta
cctcacggcggcggcggaatcgtgcttgacgtgaagatctttacacgtgaagcaggcgac
gaactaccacctggagtaaaccaattagtacgtgtttatattgtacaaaaacgtaaaatc
catgaaggcgataaaatggccggacgtcacggtaacaaaggggttatctcccgtatttta
cctgaagaagatatgccatttatgccagacggaacacctgttgatatcatgcttaaccca
ctaggggtaccatctcgtatgaatatcggacaagtacttgagctacacttaggtatggct
gctcgtgctttaggaattcacgttgcaacaccagtatttgatggtgcgaatgaagaagat
gtttggagcacagtggaagaagccggtatggcccgcgatgcgaaaacaattctttatgac
ggacgttctggtgaagcattcgataaccgtatctctgttggtgtaatgtacatgatcaaa
cttgcccacatggttgatgataaacttcatgcacgttcaactggaccttactctctagta
acgcaacaacctcttggtggtaaagcacaatttggtggacaacgttttggggaaatggaa
gtatgggcacttgaagcatatggtgccgcttatactcttcaagaaatcctaacgattaaa
tccgatgacgtggttggtcgtgtgaaaacttacgaagcgattgttaaaggcgaaagcgtt
ccagaacctggtgtgccagaatccttcaaagtactcatcaaagagcttcaaagtcttgga
atggacgttaaaatgctttccgcagacgaagaagaaatcgagatgcgtgacatggatgat
gatgactttactaatcaaaatgatgccttcaatatcgtacaaccggaaaatgcagccgct
gaaaagactgagtaa |
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