Listeria monocytogenes Finland 1998: LMLG_1167
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Entry
LMLG_1167 CDS
T01986
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lms
Listeria monocytogenes Finland 1998
Brite
KEGG Orthology (KO) [BR:
lms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lms03400
]
LMLG_1167
DNA repair and recombination proteins [BR:
lms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMLG_1167
Archaeal homologous recombinant proteins
LMLG_1167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
AAA_21
SMC_N
RsgA_GTPase
IncD
ABC_tran
DUF3947
Motif
Other DBs
NCBI-ProteinID:
AEO39173
LinkDB
All DBs
Position
complement(1670626..1673697)
Genome browser
AA seq
1023 aa
AA seq
DB search
MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD
RESFSMRSHFATDKEVTEVTLVFRLKDKIYQISRIPQQEIAKQRGNGTTTSPQKAELYEL
IGDEMKLLASSVRDVNTKMEELIQLNVDQFRQILMIPQGEFRELLVSDSKEKEVILQRLA
HTVYYEKIENLLWEKQKEAEILVVEARKKVAELAELSLPGVEVAGKTTSEISVLQTEAMQ
REQAILVELETELSVIRKQTSEAVEKVTLAKEQLLDWQNLDAYTAEVAKLETEKDLYQAI
EVRIEAAKRASNLRSQDALCIRLKEQLEAAEKNEKQVAIEAERVASQFSHAKKQKETLAE
KEAELEANKRTLFQLEEMEPKIIELEAVTIQKRRAELDWKEATNHLEKVVGSEQEIIAEM
QMMEAKLAEVNQAELANLEAINERTTIETSIEKNQELVNKRVKMAGWDKQKQVEEQTLAE
LLTEKTEIETTIKREELKRQQEQAATLAIHLHDGDACPVCGSVSHPELAKFGESANLETL
EVASAKLNEKQQAIHSAEKSISQFEWQLNEWAEIADVNLAEVEQTLAENIQQAKNLTAQI
ETLQAKVAQKETIQATLETLKINQNKAEIEKNNIAVQVENLHQQVQLAAGKLNYLEQSIP
ADLRDKAVFEHKKNELNTSIQTHIEQAERVDAAFRQAEKATTQLESTLASAQKAILSAQE
ALQEQREIFKTAMKQNDFSSYDAYKQALMSAEELKSQEEQLADFERKRHLAISRQADLTE
KLKDKQKPNIEQLEFVMREKQQQLGQSEENTIKQREFVTKRKELIENYQNSIQSVEKAEA
NYADIGLLADAARGKNARRLTFERYILAMFLDTIIHRANHRLSKMTSGRFELQRKTEKAK
GNVQSGLELEVFDEYTGLTRHVKTLSGGESFKTSLALALSLAEVVQEMAGGISLETMFID
EGFGTLDPESLEAAVECLLETQENGRLVGIISHVPELKERISARLEVTATNHGSTTKFIT
ASS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgattaaattaacgatgcaagcttttggagcttatgcaaaaaaagaagtaatc
gactttgaaaagctgggaacggaacaaatttttgtgatttctggtaaaacaggtgcgggg
aaatcaactatttttgatgcgattagttttgcgatttttggaaaagcgaatacgtttgat
cgagagagtttttcgatgcgtagtcattttgcgaccgataaagaggtaaccgaagtaacg
cttgtttttagattgaaagataagatttaccaaattagccggattccacagcaagaaatt
gcgaaacaacgcgggaatggtacgactacctcgccgcaaaaagcagaattgtatgagttg
attggcgatgaaatgaagctactggcgagttcggttcgcgatgtaaatacgaaaatggaa
gaattaattcagcttaatgtggatcagtttagacaaattttgatgattccacaaggagaa
tttagagaattactcgtatcagatagtaaagaaaaagaagtgattttgcaacggttagcg
cataccgtttactatgaaaaaatcgaaaatttgttatgggaaaagcaaaaagaagcggag
attttagtcgtagaagcgcgcaaaaaagtggcagagcttgcggaattaagtttaccgggt
gttgaggtagctgggaaaacgacgagtgaaatcagtgttttgcaaaccgaagcaatgcag
agagaacaagcgattttagtagaattagaaacagaattgagcgttattcgcaaacaaacc
agtgaggctgtcgaaaaagttacgcttgcgaaagaacaattgcttgattggcaaaactta
gatgcatatacagcagaagtagctaaattggaaacagaaaaggatttatatcaagcgata
gaagtgcggatagaagcggcgaaaagagcgagtaatttgcgttctcaagatgccctttgt
attcgtttgaaagaacaattggaagcggcagaaaaaaacgaaaaacaagtggcgatcgag
gcggagcgggtagcaagtcaattttcacatgccaaaaaacaaaaagaaacgctggcagaa
aaagaagctgaacttgaggctaacaaacgcacgctgtttcaactggaagaaatggaaccg
aaaattattgaactagaagcggtgaccatccaaaaaagacgcgctgaattggactggaaa
gaagcaaccaatcatttagaaaaagtggtaggaagtgagcaagaaatcattgcagaaatg
cagatgatggaagcgaagttggcagaagtaaatcaagcagaactcgccaatttagaagca
attaatgagcgaacaactatcgaaacaagcatcgaaaaaaatcaagaattggttaataag
cgggtgaaaatggccggctgggacaagcagaagcaagtagaagaacaaacgctagccgag
ctgctaactgagaagactgaaatagaaacaaccattaaacgcgaagaactaaaacgacaa
caagaacaagcagccacacttgcgatacatttgcatgacggcgatgcttgcccggtctgt
ggctcggtgtcacatccagaactcgcgaaatttggggaatctgccaatctcgaaacactc
gaagtagccagtgcaaaactaaacgaaaaacaacaagcgattcattcagctgaaaaatcc
attagccaattcgaatggcaactaaatgaatgggctgaaattgctgatgtaaatttagcc
gaagtcgaacaaacattagctgaaaacatccaacaagcaaaaaacctaacagcacaaata
gaaacactgcaagccaaagtagcgcaaaaagaaactattcaagcgacactggaaacatta
aaaattaaccaaaataaagcagaaatagaaaaaaataatattgccgtgcaagtagaaaac
ttacatcagcaagtccaactagctgccgggaaattaaactatttagaacaatctatccca
gcagatttacgagataaagccgtttttgagcataagaaaaacgaattaaacaccagtatt
caaacacacattgagcaggccgagcgagttgatgcggcatttagacaagccgaaaaagca
acaacccaactagaatcaaccttagcctccgcgcaaaaagccattttgagcgcacaagaa
gcattacaagaacaacgcgaaatttttaaaacagcgatgaaacaaaatgatttttcgtca
tatgatgcctataaacaagcactaatgtccgcagaagaactaaaaagccaagaagaacaa
ctggccgactttgagcgaaaacgtcatctagccatctcacgccaagcggatttaacagag
aaacttaaagataagcagaaaccgaatatcgaacaactagaattcgtaatgcgcgaaaaa
caacaacaactcggtcaatcagaagaaaatacaatcaagcaacgcgaatttgtgactaaa
cgtaaagaactgattgaaaactatcaaaatagtattcaatccgtcgaaaaagccgaagca
aactatgcggatatcgggttactcgcagacgcagcccgcgggaaaaatgcccgccgccta
acctttgaacgctacattttagccatgttcttagataccatcattcaccgagcaaatcac
cgtttatcgaaaatgacgagcggacgttttgaactacaacgaaaaacggaaaaagcaaaa
ggaaacgtccaaagtggcttagaacttgaagtttttgacgaatacaccggactaacacgc
cacgtaaaaacactttcggggggagaaagcttcaaaacatcgctagcgcttgctttatca
cttgcagaagtagtccaagaaatggcgggcgggatttcgctggaaacgatgtttattgat
gaaggattcggcacactagacccagaatcactcgaagctgcggtggaatgtttgcttgaa
acacaagaaaatgggcgcctagttggaatcatttcccatgtgccagaactaaaagaacga
atttcagcaaggctcgaagtaacggcgacaaatcatggaagtaccactaaatttattacc
gctagtagctaa
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