Listeria monocytogenes Finland 1998: LMLG_1837
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Entry
LMLG_1837 CDS
T01986
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
lms
Listeria monocytogenes Finland 1998
Pathway
lms03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LMLG_1837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lms03400
]
LMLG_1837
DNA repair and recombination proteins [BR:
lms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LMLG_1837
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LMLG_1837
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
P-loop_SecA
AAA
HEM4
UB2H
AAA_30
AAA_7
AAA_19
DUF5662
AAA_22
DUF87
AAA_5
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
AEO39954
LinkDB
All DBs
Position
complement(2503638..2505614)
Genome browser
AA seq
658 aa
AA seq
DB search
MKDKFELVSKYSPQGDQPRAIEQLVAGLKKGLKHQTLLGATGTGKTFTVSNVIQEVNKPT
LVMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQSDTYIEKDASINDEID
KLRHSATAALFERRDVIIIASVSCIYGLGSPIEYGEMLVSLRVGMEISRDQLLRKLVDIQ
YDRNDIDFQRGRFRVRGDVVEIFPASRDEHCMRIEFFGDEIERIREVDALTGEIIGEREH
VSIFPASHFVTRPDIMKKAIVNIKAELEDRLKVLRADNKLLEAQRLEQRTNYDLEMMEEM
GYCSGIENYSRHLSLRPAGVTPYTLLDYFPDDFQMVIDESHVTMPQIRGMFNGDQARKQM
LVDHGFRLPSALDNRPLRLEEFEKHINQIMFISATPGPYELEKNPDVIEQIIRPTGLLDP
IVEIRPIQGQIDDLMDEINDRVEKNERVLITTLTKKMSEDLTNYLKEAGVKVQYLHSEVK
TLERIEIIRDLRLGVYDVIVGINLLREGIDLPEVSLVAILDADKEGFLRSERSLIQTMGR
AARNENGRVIMYADKMTDSMRNSIGETERRRKIQIEYNEKHGITPKTIKKEIRGIIAATS
AADEREAVKQHDLSKMSKKERDVFIEGMEHEMKEAAKALDFERAAELRDALLEIKAEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggataaatttgagttagtttctaagtatagcccacaaggagaccaacctagagcg
atagaacaattagttgcgggattaaaaaaaggcttgaaacaccaaactttacttggtgca
accggtacagggaaaacttttaccgtatccaatgtgattcaagaagtaaataagccgaca
cttgtcatggctcacaataagacgttagcgggacagctgtatagcgagtttaaagagttt
ttcccaaataacgctgtagaatattttgtcagttactatgattactatcaaccagaagcc
tatgttccgcaaagtgacacatatatcgaaaaagatgcaagtatcaatgatgaaatcgat
aagcttcgtcactctgctactgctgcgctttttgaacgtcgcgatgtaattatcattgcg
agtgtatcgtgtatctatggcttaggttcgccgattgaatatggagagatgctcgtttcg
cttcgtgttggcatggaaattagccgtgatcagctactgcgcaaattagtagatattcaa
tatgatcgaaatgatatagattttcaacgtggacgcttccgtgttcgcggtgatgttgtc
gaaattttcccagcttcaagagatgaacactgtatgcggattgaatttttcggtgatgaa
attgaacgaattagagaagtagatgcacttactggtgaaattataggagaaagagaacat
gtttccattttcccggcatctcactttgtcaccagacctgatattatgaaaaaagcaatt
gttaatataaaagctgaactcgaagaccgtcttaaagttttacgtgcagataataaattg
ctagaagctcagcgccttgaacagcgaacgaattatgatttggaaatgatggaagaaatg
ggctattgctctggtattgagaactattctagacatttatcccttcgtccagcgggagtt
acaccatacacgttactcgattacttcccagatgatttccaaatggtaattgatgagtca
cacgttacgatgccgcaaattcgtggtatgtttaacggggaccaagccagaaaacaaatg
ctagttgatcatggctttagattgcctagcgctctagataataggccgcttcgtttagaa
gaatttgagaagcatatcaatcaaattatgtttatatccgctacaccaggcccttacgaa
ttagaaaaaaatccagatgtcattgaacaaatcattcgaccaactggcttgctagaccca
atcgtagaaatccgtccgattcaaggacaaattgatgacttaatggatgagattaacgat
cgcgtcgagaaaaatgaacgtgttttaatcaccaccttaacgaaaaaaatgtccgaggat
ttaaccaactatctcaaagaagctggtgttaaagtacagtatctccactcggaagtgaag
acgctcgagcgaatcgaaatcattcgtgaccttcgacttggtgtgtatgatgttatcgtt
ggaattaacttacttcgtgaaggaatcgatttacctgaagtatctcttgtcgctatttta
gatgcggacaaagaaggattccttcgttccgagcgttccttaattcaaacaatgggtcga
gctgctcgtaatgaaaacggtcgagtaatcatgtatgctgataaaatgaccgattcgatg
cgcaattctattggcgaaacagaacgccgtcgtaaaatccaaattgaatataatgaaaaa
cacggcattacgccaaaaacaatcaaaaaagaaattcgtggtatcatcgcagcgacttct
gccgcagatgaaagagaagcagtgaagcaacatgatttaagcaaaatgtctaagaaagaa
cgcgatgtattcattgaaggtatggaacatgaaatgaaagaagcagctaaagcacttgat
ttcgaacgtgctgctgaacttcgcgatgctttactggaaataaaagcggaaggatga
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