Listeria monocytogenes Finland 1998: LMLG_2983
Help
Entry
LMLG_2983 CDS
T01986
Name
(GenBank) DNA polymerase III
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lms
Listeria monocytogenes Finland 1998
Pathway
lms03030
DNA replication
lms03430
Mismatch repair
lms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMLG_2983
03430 Mismatch repair
LMLG_2983
03440 Homologous recombination
LMLG_2983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lms03032
]
LMLG_2983
03400 DNA repair and recombination proteins [BR:
lms03400
]
LMLG_2983
Enzymes [BR:
lms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMLG_2983
DNA replication proteins [BR:
lms03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMLG_2983
DNA repair and recombination proteins [BR:
lms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMLG_2983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
POT1
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AEO39103
LinkDB
All DBs
Position
complement(1593620..1596946)
Genome browser
AA seq
1108 aa
AA seq
DB search
MGFVHLQVASAYDLLSSTASIDKLIAKAKEYHYPALAITDKNVLYGVVEFYQKCLAADIK
PIIGMTVTIQGYLNPINSYELILIAESTAGYHQLLKIASAIQTREEGPELPQSWLRAYSS
DLIVISPGAKGEIERLLMEEDREGALEVYANLVEIFGKESVYLSAQKENPRLFAKIETFS
SEENVPVVATKNVQYLEPKDAQAKEVLTAIRDNRTVDWTTLPLAGPNYFTSQDEMERDWQ
TAFEKQACLETGELANRCHVEIALDQHLLPRFPLNEGQNASDVLRQTAFAGLKERNLLGM
EYQERLEYELKVITEMGFADYFLIVWDVIRYSREAGVLTGPGRGSAAGSLVSYALRITDV
DPIRYNLLFERFLNPERITMPDIDLDFPDNRRDEVISYVVSKYGEAHVAQIGTFGTLAAK
AAIRDTARSFGLNSVLLSEWSKLIPSQLGITLQKALQESPRLENHIKSSKENEMIWEVAC
QLEGLPRHISTHAAGIVISDKPLVEQVALQLGSGDARLTQFAMGELEKIGLLKMDFLGLR
NLSLLDRVLKSVNYTRETPLTLADISLEDKKTLKLFQTGDTTGVFQFESDGIRRVLRKLK
PTSFEDVVAVDALYRPGPMEQIDTFIARKHGKEKIQYPHPDLASILEVTYGVIVYQEQII
QVANQMAGFSLGEADLLRRAVSKKKADVLNEERIHFVEGAKSKGYSEASANQVYDMIVQF
ANYGFNRSHAAAYSKIAFQLAYLKAHFPAAFMSSLLSSVFGNDDKISQYITEAKNYGISM
LAPSINHSNYYFQMENETSIRYSFRVIRKVPTKFILEIINERKKAPFRDFFDFCERMPHK
MLSETVLEALVFSGCFDEFGEDRATILATIDAVLQYISLLGEDSKGMNLFAEDDDFLKKM
KPRYRKTAPISIDEKLEKEKLYTGQYVSAHPVSYYQNKLQNLAITRLANLSSGKNYQVAA
YVHEVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADTRN
GELQLIINKAEDLKEIKAPVRLFLKLTETQQMEQIKPILARHKGDSKVIVHQAVTKQTAE
LKNIQVSPSNELQEALVELLGKENVVIK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtggggtttgttcatttacaagttgcgagcgcttatgatttgctatctagtacagcgtcc
atcgataagctaatcgctaaagcaaaagaataccattatccagccttagcaattacggat
aaaaatgtactttacggagtagtcgagttttatcaaaagtgtttagcggcggatataaaa
ccaattatcgggatgacggtgacaatacaaggttacttaaatccaattaattcatatgag
ttgatattaattgcggaatcaaccgctggatatcaccagttattaaaaatcgcgagtgct
attcaaacgcgcgaagaaggaccggaattaccacaaagctggttacgagcttatagcagc
gatttgattgttatttcacctggtgccaaaggagaaatcgaacgacttctgatggaggag
gatcgcgagggagcactagaagtttatgcaaatttagtcgaaatttttggtaaagaatct
gtttatttatctgcccaaaaagaaaatccacgtcttttcgcaaaaatagaaactttttct
tcagaagaaaatgtaccggttgttgcgacgaaaaatgtacaatatttagagccaaaagat
gcgcaagcgaaagaagttttaacggccattcgtgataatcgaacagttgactggacgact
ttgccacttgccggaccaaactactttacctcgcaagatgaaatggaacgtgactggcaa
acagctttcgaaaagcaagcgtgtcttgaaacgggagaactcgcaaaccgttgtcatgtc
gaaattgctttggatcagcatttattacctagatttccgttaaatgaaggacaaaatgca
tcagatgttttgcgtcaaacagcctttgcgggattaaaagaacgaaatttactagggatg
gaatatcaggaacgcttagaatatgaattgaaagttattacagagatggggtttgcagat
tactttctgatagtttgggatgttattcgttattcgcgtgaggcaggagttttaacaggt
ccaggtcggggttcagcggcggggtcccttgtttcctatgcacttagaattacggatgta
gacccgattcgatacaatttgctatttgagcgatttttaaacccagaacgtatcacgatg
cccgatattgatttggattttccagataatcgccgggatgaagtgatttcgtatgtggta
tctaaatacggagaagcgcatgtggcgcaaattggcacatttggaacattggctgctaaa
gcggcgattcgtgatactgcacggagttttggcttgaattccgtactattatcagaatgg
tctaagttaattccgagtcaattaggcattacgctgcaaaaagcattgcaagaaagtccg
cgtttagaaaatcatattaaaagttcaaaagaaaacgaaatgatttgggaagttgcttgt
cagctggaaggcttgccgcgtcatatttcaacgcatgcagcggggatagtaattagtgat
aagccactcgtagaacaagttgcgctacaattgggtagtggagacgcacgtttgacccag
tttgccatgggagaattagagaagattggcttacttaaaatggattttctaggacttaga
aatcttagtttactcgatcgtgttttgaaatcagtcaattatactagagaaactccgtta
acattagcagatatttctttagaggataaaaaaacattaaaactattccaaacaggcgac
acgacaggtgtattccaatttgaatcggacgggattcgacgcgtgctccgaaaattaaag
ccaacttcttttgaagatgttgtggcagtagatgcgctttatcgtccgggtccaatggaa
caaattgatacgtttatcgctagaaaacacggaaaagaaaaaattcagtaccctcatcca
gatttagcgtctattttagaagtgacatacggcgttatcgtttaccaagaacaaattatt
caagtggcaaaccaaatggctggattttctcttggagaagcagatttgttaagacgagct
gttagcaagaagaaagcggatgtcctaaacgaggagcggattcactttgtagaaggcgct
aagagtaaaggctattcagaagctagcgctaaccaagtatatgatatgattgtccaattc
gcgaactacggtttcaacagaagtcacgcagcggcctattcaaaaatcgcttttcaatta
gcttacttaaaagcacattttccagccgcgttcatgtcatcacttctcagctcagttttc
ggaaacgatgacaaaatttcccaatacattacagaagcaaaaaactacggaattagcatg
ttagcgccaagcatcaaccatagtaactactacttccaaatggaaaatgagacatctatt
cgttatagtttccgtgttattcgtaaagtgccaaccaaatttattttagaaattattaac
gaacgaaaaaaagcacctttccgagatttctttgatttttgtgaaagaatgccacataaa
atgctctcagaaaccgttttagaagcactcgtattttctggttgttttgacgaatttggt
gaagaccgagcgacgattttggcaactattgatgctgtgctacaatatatttcgctactc
ggtgaagactcaaaagggatgaatcttttcgcggaagatgatgactttttgaaaaagatg
aaaccacgctaccggaaaaccgcgcccatttcgattgatgaaaagttggagaaagaaaaa
ttatacactggtcaatatgtttcagcgcatccagtatcgtattatcaaaacaaattacaa
aaccttgcaatcacaagacttgcaaatctttcttctggcaaaaattatcaagtagctgcc
tatgtgcacgaagtaaaatcaattaggacaaaaaaaggcgaaacgatgtgctttttaaca
attagtgatgactccaaagaactgagtgcagtgatgtttccagaaagttaccgtaaattc
gctaattttgcacaaaaaggggaaatcctctttttgcaagtgaaagcagatacgagaaac
ggagaactccaattaattattaataaagcagaagatttaaaagaaattaaagccccagtt
agattatttttgaaattaacagaaacacagcaaatggagcaaattaaaccgattttagcg
cgtcataaaggggatagtaaggttatcgtacatcaagcggtaacgaaacaaacagcagag
ctgaaaaatattcaagtatcgccatcaaacgagttgcaagaagcgttagtagagctgctt
ggtaaagagaatgtagtcattaagtaa
DBGET
integrated database retrieval system
