Listeria monocytogenes 10403S (serotype 1/2a): LMRG_00692
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Entry
LMRG_00692 CDS
T01984
Name
(GenBank) ATP-dependent RNA helicase dbpA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lmt
Listeria monocytogenes 10403S (serotype 1/2a)
Pathway
lmt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMRG_00692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmt03019
]
LMRG_00692
03009 Ribosome biogenesis [BR:
lmt03009
]
LMRG_00692
Enzymes [BR:
lmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMRG_00692
Messenger RNA biogenesis [BR:
lmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LMRG_00692
Ribosome biogenesis [BR:
lmt03009
]
Prokaryotic type
rRNA helicases
LMRG_00692
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEO06229
UniProt:
A0A0H3GFT7
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All DBs
Position
1229812..1231224
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AA seq
470 aa
AA seq
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MNNLKLSEEIKRAINELGYTEATPVQKAVIPVALTGEDIVAKSQTGSGKTAAFAIPIAEQ
VEWEENKPQALIIVPTRELAMQVKTECTNIGRFKRVKAAAIYGQSPFAKQKLELSQKNHI
VVGTPGRLLDHIEKGSLNVDKVAHLVLDEVDEMLSMGFIDQVEDILSRLPKQRQNLFFSA
TMPEEMQDLIKRYQDNPMVIEMASEKTNPIFHVEMQTDNKEKTLKDVLITENPDSAIIFC
NTKNQVDELTDLLDVKASKIHGGLRQEDRFRAMDDFKSGKSRFLIATDVAGRGIDVDNVS
LVINYDLPIEKENYVHRIGRTGRAGKSGKAISFVKTNENPLLRDIEEMLDVTIEKKRKPT
VIEVKANEEAFHKKQQKRPTIKKARGEKLNKNIMKLYFNGGKKKKIRAVDFVGTISKLEG
ITAEDIGIITIEDHVSFVEILNGKGPAVLEMMRSRKVKGRRLKVNEARKR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttaaaattaagtgaagaaattaaaagagcgattaatgaactaggatataca
gaagcaacacctgttcaaaaagcggtaattccagttgccttaacaggagaagatattgtt
gctaaatcacaaactggtagtgggaaaacagcagcatttgctattcccattgcagaacag
gttgaatgggaagaaaataagccacaagcactaatcatcgttccaacacgagaacttgca
atgcaagtcaagacagaatgtacgaatatcggacgatttaaacgtgtcaaagctgcagca
atatatggacaatcaccatttgctaaacaaaaattagaactaagccaaaaaaatcatata
gtcgttgggacccctggtcgcctacttgaccatattgaaaaaggatcactgaatgtcgac
aaggttgcccatttagttttagatgaagtagatgaaatgttaagcatgggatttattgat
caagtggaagatatccttagccgcttaccaaaacagcgccaaaatctatttttctctgca
actatgccagaagaaatgcaagatttgatcaaacgttaccaagataatccaatggttatc
gaaatggcatcagaaaaaacaaatcctatcttccacgtggagatgcaaacagataataaa
gaaaaaacgttaaaagatgttttaattacggaaaacccggatagtgcgattattttttgc
aatacaaaaaatcaagtcgatgaactcactgatttacttgatgtaaaagctagtaaaatt
catggtggcttaagacaagaagatcgtttccgagcaatggatgatttcaaaagtggcaaa
tcgcgtttcttaattgcgacagatgtggcagggcgtggaatagatgtggataatgtatcg
ttagtcattaactacgatttaccaattgaaaaagaaaattatgtgcatcgtatcggtcgt
actggacgcgctggcaaaagtgggaaagctattagtttcgtgaaaacaaatgaaaatcca
cttttgcgtgatattgaagagatgctcgatgttacaattgaaaaaaaacgtaaaccgaca
gtgattgaagtgaaagcaaacgaagaagctttccacaaaaaacaacaaaagcgcccaaca
atcaaaaaagctcgtggggaaaaattaaataaaaacattatgaaactgtattttaacggg
ggcaaaaagaaaaaaatccgtgcggtagattttgtgggaactatttctaaattagaagga
attacggccgaagatattggaattattacgattgaagaccatgtttcttttgtcgaaatt
ttaaatggaaaaggtccggcagtgctggaaatgatgcgctctcgtaaagtgaaaggtaga
cgcctgaaagtaaacgaggccagaaaacgataa
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