Listeria monocytogenes 10403S (serotype 1/2a): LMRG_01562
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Entry
LMRG_01562 CDS
T01984
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lmt
Listeria monocytogenes 10403S (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:
lmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmt03400
]
LMRG_01562
Enzymes [BR:
lmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMRG_01562
DNA repair and recombination proteins [BR:
lmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LMRG_01562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AEO07256
UniProt:
A0A0H3GMK5
LinkDB
All DBs
Position
complement(2315549..2319022)
Genome browser
AA seq
1157 aa
AA seq
DB search
MTLQIIAGRSGTGKTTHLMDEVGEKIKQNSKTYIFIVPDQMTFQMETSFLNKENLAGMLG
TQIFSFSRLAWKILQETGGLSKTFLSQTGIEMVIRKAALDQKDKLKIFSRATSRKGFYSE
LANLFKEMKQEEVSIEDMVKSATNLSTSVNNKVHDISLIYQKYEELLADKFLENEDYLRL
LAEKIADSDYLNQTEIVIDGFTSFSKQELTVIGELMRKCDKVTISLTLNVPEIQHGLDEY
SMFKASTEAYYALLELAKLNGTQVEENKFFLENKRAKTESLAFLANTWGHNKFMSFKNEP
QNLKIHQANNRRAEIEGIAREIRQLALNGYRYRDIAILTRNLGDYDVLCETVMEAYNIPT
FIDKKRAMAKHPFIEFIRSSLDAILFNWKYEPIFQAVKTEFFFDITEKSSLNRRKADILE
NYVLENGIQNKWKWEKEGDWIYRKIRGLSTNVLPQTDEEIHMQSIINEMRNLIVNPLSTL
ELNLRKAKTGMEFALALYHYLEQVNAVERLESWRQRAEEQGYLELAREHEQAWSSISALL
DEFVEVLGEETLDLDSFTEIIGTGLDALEFSLLPPSLDQVVLSDMENAKLLDMKVIFAIG
MNDGVMPLRQKDKGIFSDQDRDALRAEDSKLKPSAKNNIGEEDLLAYKIISLPSDKLFLS
YPAADEEGKVLSESNYLRKIKGQFNELNESVYLTDPSLLSDAEQSSYIRSKQATLGLLTS
QLQMYKRGYTLSSVWWDAYNSYFENEKESTMAKQVLSSLYYENKTKPLQETTAKNLFGET
IHASVSRMEKFFSCEFQHYAQYGLKLEERGHFQLQAVDMGEIFHGAMEWISAELKRNNLD
WGNLKEEECKQMAKLAMTFLAPKIQHEILLSSKRMEYIQYKLLQIITRATTVLNEQAKSS
AFRPVGLEVDFGLKGDIPPLKIPLQSDSELLLQGRIDRIDMAEQDDRTFLRIIDYKSSSH
DLALTEVYYGLALQMLTYLDIVVTNAQKMIGKTAEPAGVLYFHMHNQYVQAEKELSDGAI
AKELQKSSKMKGLILSDPVAVSLMDMTLEKGKASTIIPAEIKQNGELSARSRTATRAEFD
KMRQFVRHKYQEAGNKILDGAVSINPYKLKERTPCQFCSFRSFCGFDPSLTSNQYRHLAN
EKAETILTKMDIEGGTQ
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgacacttcaaataattgcaggtagatcaggcacaggcaaaacaactcatttaatggat
gaggttggagagaaaattaaacaaaattctaaaacgtatatctttattgtcccagatcaa
atgacgtttcagatggagacaagctttttaaataaggaaaatttagcaggtatgcttggg
acacaaatatttagttttagccgtttagcgtggaaaattcttcaagaaacaggtggatta
tctaaaactttcttaagtcagacaggtatagaaatggttatcagaaaagcagcccttgat
caaaaagataaattaaaaatcttttcaagagctacttctagaaagggtttttattcagag
ttagcgaatttatttaaagaaatgaaacaagaagaggtttccattgaagacatggtcaag
agcgctacgaatctgtctacaagtgtgaataataaagtgcatgatatctcgctaatctat
caaaagtatgaggaattattagcggataaattccttgaaaatgaagactatttgagattg
cttgcagaaaaaattgccgatagtgattatttaaatcagactgaaatagtcattgatggt
tttacttctttctcaaaacaagagctgacagttattggagaattaatgcggaaatgtgat
aaagtaacgatttctttgacgcttaatgttcctgaaattcagcatggactagatgaatac
agtatgttcaaagcaagtacagaagcgtattatgctctattagagttggctaaattaaat
ggcactcaagtcgaggaaaacaagttcttcttagagaataagcgagcaaaaacagaatca
ctagcctttttagctaatacttgggggcataacaaatttatgtctttcaaaaacgaacct
caaaatttaaaaatccatcaagcgaataacagacgtgcagaaatagaagggattgctcgt
gagattcgtcaactagcattaaatggatatagataccgcgacatagctattttgacaaga
aatcttggagattatgacgttttatgtgaaacggtgatggaagcatataacattcctacc
tttattgataaaaagagagctatggctaaacacccttttatcgagtttattcgttctagc
ttagatgctattctatttaactggaagtacgaaccaatctttcaagcagttaagacagag
tttttctttgatattaccgaaaaatcaagccttaacagacgtaaagcagatattcttgaa
aactatgtattagaaaatggtattcaaaataaatggaaatgggaaaaagaaggagattgg
atttaccggaaaatccgcggactatccaccaatgtattgcctcaaacagatgaggagatt
catatgcaatctatcattaatgagatgaggaatcttatagtgaatccactttctacttta
gaattaaatctaaggaaggcaaaaacagggatggagtttgctttagctctttatcattat
ttggagcaagtaaatgctgtagaacgattggagtcatggagacaaagagcagaagagcaa
ggctatttagaacttgcacgagaacatgaacaagcatggagctccatttccgcacttttg
gatgaatttgtagaagttttaggagaggaaacgttagatctagacagttttactgaaatt
attggaacgggtcttgatgcacttgaattttcgcttttgccaccttccttagaccaagta
gttttatctgatatggagaatgcgaaattgctagatatgaaagtgatttttgctattggg
atgaatgacggtgttatgccgctacgtcaaaaggataaagggattttttcggatcaggat
agagatgcattgcgtgctgaagacagtaaattgaaaccatctgctaaaaataatattggt
gaagaagacttattagcatataaaataataagtctccctagtgacaaattatttcttagt
tatcctgccgctgatgaagaaggaaaagtattaagcgaatccaattatttaaggaaaata
aaaggacagtttaatgaactaaatgaatcagtttatttaacagacccgagcttattaagt
gatgctgaacaaagtagttacattcgctctaagcaagcaacattaggattgttgacaagt
caattacaaatgtataaacgaggttacacgctgtctagtgtatggtgggatgcctacaat
agttattttgaaaatgaaaaagaatcaacaatggctaagcaagtgctatcgagtctatat
tatgaaaataaaacaaaaccattacaagaaacaactgctaaaaacttatttggagaaact
attcatgcaagtgtttcaagaatggagaaatttttcagttgtgagttccaacattatgct
caatatggcttgaaattagaagagcgagggcattttcagttgcaagccgttgatatggga
gagattttccatggagcaatggaatggatctcagcagaattaaaaagaaataatctggat
tggggtaatttaaaagaagaagaatgtaagcaaatggcgaaacttgcaatgacattccta
gctcctaaaatccagcatgaaattttgcttagctctaaaagaatggaatatattcagtat
aaattactccaaatcataacgagggcaacaactgttttaaatgaacaagcaaaaagcagt
gcgtttcgtcctgttgggttagaagttgattttggtttgaaaggagatattccgccatta
aaaatacctcttcaatcagatagcgaacttcttttgcaggggcgaattgatagaattgat
atggcagaacaagatgatcgaacgttcctacgcattatagattataaatcaagttcgcat
gatttggcgctcacagaagtctattatggtttagcgcttcaaatgcttacctacctggat
attgtagtaacaaatgcacaaaaaatgattggcaaaactgccgaaccagctggggtgctg
tatttccatatgcacaatcaatatgtacaagcagagaaagagttaagtgatggggctatc
gcaaaagaattacaaaaaagctccaaaatgaagggattgattttatccgatcccgtggct
gtttcattaatggatatgacccttgaaaaaggaaaagcatctactattattccggcagaa
ataaaacaaaatggagagttgagtgcgagatcaagaactgcgacaagagcagaatttgat
aaaatgcgacaatttgtccgtcataaatatcaagaagctgggaataaaatacttgatgga
gcagtttcaattaatccatataaactaaaagaaagaacgccttgtcaattttgcagtttc
cgctcattttgcggatttgatccatctttaacaagtaatcaatatagacatttagctaat
gaaaaagcagaaacaattttaacaaaaatggatattgaaggagggacgcagtag
DBGET
integrated database retrieval system
