Listeria monocytogenes 10403S (serotype 1/2a): LMRG_02650
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Entry
LMRG_02650 CDS
T01984
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lmt
Listeria monocytogenes 10403S (serotype 1/2a)
Pathway
lmt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMRG_02650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmt03021
]
LMRG_02650
03400 DNA repair and recombination proteins [BR:
lmt03400
]
LMRG_02650
Enzymes [BR:
lmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LMRG_02650
Transcription machinery [BR:
lmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LMRG_02650
DNA repair and recombination proteins [BR:
lmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LMRG_02650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AEO05266
UniProt:
A0A0H3G8X2
LinkDB
All DBs
Position
268638..272243
Genome browser
AA seq
1201 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSHGEVKKPETINYRTLKPERDGLFCERIFGPMKDWEC
SCGKYKRVRYKGVVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVMDM
SPRALEEIIYFASYVVTEPGDTPLEKKQLLSEREYRVYREKYGKGFSAGMGAEAIKKILA
DIDLEKETNDLKEELKSAQGQRRTRAIRRLEVMEAFRNSGNNPSWMVLDVLPVIPPEIRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVGRGLAHNIKSAKRKIERMAPEIWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREKAVGEGTIFKDINEAQLAYQNGYVHLHSRIAVF
AGSIPNERFTDEQRNQLLITTVGKLIFNTILPKSFPYINEPTKFNLEIETPAKYFVDTTT
DVRAHIAAQELIDPFKKKILGNIIAEVFKKFHITETSKMLDRMKDLGFKISTKAGMTVGI
ADILTLEEKHEILEKAHDTVEKITKSFRRGLITDDERYERVIAVWNAAKDEIQGKLILSL
DRLNPIFMMQDSGARGNISNFTQLAGMRGLMADPSGRIVELPITSNFREGLTVLEYFIST
HGARKGLTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLTIKAIREGTEIIEPLE
ERLEGRYSRKTIRHPETKEVIARENDLITEAIATQIVDAGIEEVTIRSAFTCNTKHGVCK
KCYGKNLATGTEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAIITEVGGEVVSIEEGRDRQQEITIQGTDDRRSYNIPYTARLRVEEGTIVER
GEALTEGSVDPKALIRVRDVLSVQEYLLAEVQKVYRMQGVEIGDKHVEVMVRQMLRKIRV
MDTGDTNILPGTLMDIHTFTEANRDAILSGSQPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVILGKLVPAGTGIGRYRKLKSEVIKETAEVTDEITN
I
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
ttgttagatgttaataattttgagtatatgaaaatcggtctggcatctccagataaaatt
cgttcatggtctcatggtgaagtaaaaaaacctgaaaccatcaactacagaacgcttaaa
cctgaacgtgacggcttattctgtgaaagaatttttggaccaatgaaagactgggaatgt
tcttgtggtaaatacaaacgtgttcgctataaaggtgtagtttgtgaccgttgtggagta
gaagtaacgaaatcaaaagtccgtcgtgaacgtatgggccatattgaactcgcagctcct
gtttctcacatctggtacttcaaaggaattccaagccgtatgggtcttgttatggatatg
tccccacgtgcattagaagaaattatctattttgcatcttacgtggttacagaaccaggc
gatactccacttgaaaagaaacaacttttatctgaacgtgaataccgcgtttaccgcgaa
aaatatggtaaaggtttctcagctggtatgggcgcagaagctatcaaaaaaatcttagcc
gatatcgacttagaaaaagaaacaaatgatttaaaagaagaactaaaatccgcacaaggt
caacgtcgtactcgtgcgattcgtcgtttggaagttatggaagctttccgtaattccggc
aacaacccaagctggatggtacttgacgtgctaccagttatcccaccagaaattcgtcca
atggtacaacttgaaggtggccgttttgcaacaagtgatttgaatgacttatatcgtcgg
gtaatcaaccggaacaaccgtttgaaacgcctacttgatctaggtgcaccaaacattatc
gtgcaaaatgaaaaacggatgctacaagaagctgtcgatgctttaattgacaacggtcgt
cgtggtcgtccagtaacaggtccaggtaaccgtccgcttaaatccctttctcatatgctt
aaagggaaacaaggtcgtttccgtcaaaacttactaggtaaacgtgtcgattattctggt
cgttccgttatcgtagttggacctaacttaaaaatgtaccaatgtggtcttccaaaagaa
atggcgcttgaattattcaaaccatttgttatgaaagaactagttggacgcggcttagca
cacaacattaagagcgctaaacgtaaaatcgaacgtatggctccagaaatctgggacgta
ttagaagaagttattcgtgaacatccggtattacttaaccgggcgcctacgcttcacaga
cttggtattcaagcatttgaaccaactctagttgaaggtcgcgcaatccgtcttcaccct
cttgtatgtacagcttacaacgctgactttgatggtgaccaaatggcggttcacgttcct
ttatccgcagaagcacaagcagaagcacgtattttaatgcttgcagctcaaaacattttg
aaccctaaagatggtaaaccagttgtaacaccttcccaagatatggtgctaggtaactac
taccttactttagaacgtgaaaaagctgtcggcgaaggtactatcttcaaagatatcaat
gaagcacaacttgcgtatcaaaacggctatgtacacttacactctcgtattgctgtattt
gctggttcgattccaaatgaacgtttcactgatgaacaacgcaaccaattattaattacg
actgttggtaaactgattttcaacacaatcttaccaaaatcgttcccttatattaatgaa
ccaacgaaatttaacttagaaatcgaaacaccagctaaatatttcgttgatacaacaact
gatgttcgtgctcatattgctgcacaagaactaattgatccattcaagaagaaaatcctc
ggtaacattatcgcggaagtcttcaagaaattccatattaccgaaacttcaaaaatgctt
gaccgtatgaaagatcttggtttcaaaatctcgactaaggccggcatgacagtaggtatt
gcggatatcttaacacttgaagaaaaacatgaaattcttgaaaaagcacatgatacagtt
gaaaaaatcactaaatcattccgtcgtggtctgattacagatgatgaaagatacgaacgc
gttatcgctgtatggaatgctgccaaagatgaaatccaaggaaaactgatcttgagtttg
gatcgcttaaacccaatcttcatgatgcaagattccggagctcgtggtaacatttccaac
tttacacagcttgctggtatgcgtggactgatggctgacccatccggacgtatcgtagaa
ttgccgattacatctaacttccgtgaaggtttaacggtcttagagtacttcatttctacc
catggtgcgcgtaaaggtcttaccgatacagcccttaaaacagccgattccggttacctt
actcgtcgtcttgttgacgtggctcaagatgttatcattcgtgaagacgattgtggcaca
gaccgcggtcttacaattaaggctattcgtgaaggtactgaaatcatcgaaccacttgaa
gaacgtctggaaggtcgttattctcgtaaaacaattcgtcacccagaaacaaaagaagtt
attgcacgtgaaaatgacttaattacagaagcaattgccactcaaatcgttgacgcaggc
attgaagaagtaactatccgttctgcattcacatgtaatacaaaacacggcgtatgtaaa
aaatgttatggtaaaaacttggcaactggtacagaagtcgaagttggagaagcagttggt
atcatcgctgcccaatctatcggggaaccaggaactcagcttactatgcgtactttccat
acaggtggggttgccggagacgatatcacgcaaggtcttccacgtattcaagaaatcttt
gaagcgcgtaatccgaaagggcaagctatcatcactgaagttggcggtgaagttgtttct
atcgaagaaggtcgtgatcgtcaacaagaaatcactatccaaggtacagatgaccgccgt
tcttacaacattccttacactgctcgcctgcgtgtagaagaaggaactatcgtagaacgt
ggggaagctctaactgaaggttctgtggatcctaaagccttgattcgtgttcgtgacgta
ttatccgttcaagaatatctacttgcagaagtacaaaaagtttaccgtatgcaaggggta
gaaattggcgataaacacgttgaagtaatggttcgtcaaatgttacgtaaaatccgcgta
atggatactggtgatacaaacatcttaccaggtacattaatggatattcatacgtttaca
gaagccaaccgcgatgctatcttaagtggtagccaacccgcaacaggtcgtccagttctt
ctagggattacaaaagcttcccttgaaactgattccttcttgtctgccgcatcattccaa
gaaacaactcgtgtcttgacagatgctgcaatcaaaggaaaacgtgacgaacttctagga
cttaaagaaaatgttatcctaggtaaacttgttccagctggtacaggtattggtcgttac
cgcaaactgaaatccgaagttatcaaggaaacagctgaagtaactgacgaaatcacaaat
atttaa
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