Listeria monocytogenes 10403S (serotype 1/2a): LMRG_02652
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Entry
LMRG_02652 CDS
T01984
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
lmt
Listeria monocytogenes 10403S (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:
lmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmt03016
]
LMRG_02652
Enzymes [BR:
lmt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
LMRG_02652
Transfer RNA biogenesis [BR:
lmt03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
LMRG_02652
Prokaryotic type
tRNA splicing ligases
LMRG_02652
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF6939
SRP_TPR_like
Motif
Other DBs
NCBI-ProteinID:
AEO05264
UniProt:
A0A0H3G9H8
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All DBs
Position
263235..264413
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AA seq
392 aa
AA seq
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MLTLKGKYNEAKVFTDNVDDNTIGEIITLCNQPFAKDSKIRIMPDTHGGKGCVIGTTMTI
QDKIVPNLVGVDIGCGLYVVKLKPGKLKMDFDKLDKVIRERVPSGSKTHDKPVDEFDLEG
VVAPIHRGWVARSIGTLGGGNHFIEVNQGSDGIYLVIHSGSRVLGKEIAEYHQEVAYKRL
DILRKELKLDATAAKKRGNLEMANNLNGEREQVKLDYDLSYVTGSDLNHYLNDMEIAQKF
AARNRYIMAETILKAMKWNKAVVSAFDCVHNYIDIDNRMLRKGATSAQLGEQIIVPLNMR
DGSILATGKGNADWNYSAPHGAGRMLSRSKAKAQISLESYQAAMKDVWTTSVSKKTIDEA
PKAYKSAKQLLVDVEDTMDIQEIIKPLYNFKA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgctaacattaaaaggaaaatataacgaagcgaaagtttttacagataatgtggacgac
aataccatcggggaaattattacgttgtgtaatcaaccgtttgcgaaggatagtaaaatt
cgcatcatgcccgacacgcacggtggtaaaggctgtgtgattggaacgacaatgacaatt
caagataaaattgtaccaaatttggttggagtggacatcggttgcggactgtatgtagtg
aaactaaaacctggcaagttaaaaatggattttgataagctagataaagttattcgcgaa
cgagtgccatccggaagcaaaacacacgataagcctgtagatgaatttgatttggaaggt
gtagttgcgccaattcatcgcggctgggtagctagaagtatagggacgcttggtggcggg
aaccattttattgaggtgaatcaaggctctgacggtatttaccttgtaatccatagtgga
agtcgggtgcttggtaaagaaatcgcggaatatcaccaagaggtagcttataaaagatta
gacatattgcgtaaagaattaaaattagatgcaactgctgcgaaaaaacgtggcaattta
gaaatggctaataacttgaacggtgagcgagagcaagtgaaattggattatgacttatcc
tatgtgacgggctctgatttaaaccattatttaaatgacatggaaattgcacaaaaattt
gcagcgcgtaatcgttacatcatggcagaaactattttaaaagcgatgaagtggaataag
gcagttgtttcggcgtttgattgtgtgcataattatattgatatcgacaaccgcatgctt
agaaaaggtgcgacatctgctcagcttggggagcaaattatcgttccgcttaatatgcgt
gatggcagcattcttgcaacgggtaaaggaaatgcagattggaattactcggcgccacac
ggggcgggaaggatgctaagtcgctctaaagcaaaagcgcaaatcagtttagagagctat
caggcagcgatgaaagacgtttggactacttctgtttctaaaaaaacaattgatgaagct
ccaaaagcctataaatcagctaaacaattacttgttgatgtagaagatacgatggatatt
caagaaataattaaaccgttatacaatttcaaagcatga
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