| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
lmu Limosilactobacillus mucosae
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:lmu00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LBLM1_01485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:lmu03021]
LBLM1_01485
03400 DNA repair and recombination proteins [BR:lmu03400]
LBLM1_01485
Enzymes [BR:lmu01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LBLM1_01485
Transcription machinery [BR:lmu03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LBLM1_01485
DNA repair and recombination proteins [BR:lmu03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LBLM1_01485
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
310836..314474
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| AA seq |
1212 aa
MIDVNKFESMQIGLASPQKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDYEC
ACGKYKRIRFKGRVCDRCGVEVTSSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVLDAGDTPLEKKQLLSEAEYREKKEEYGDRFTAEMGAEAIQKLLA
DVDLEKEATELKAVLKEATGQKRTRAVRRLDILEAFLKSGNKPEWMVMDVIPVMPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLELNAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVAGPGNRPLKSLSHLLKGKQGRFRQNLLGKRVDYSGRSVIDVGPNLKMNQMGLPVP
MAMELFKPFIMHELTKRGLATNVKAAKRLIDKRDNKVFDVLEDVISEHPVLLNRAPTLHR
LGIQAFEPVLVSGKAMRLHPLVCAAYNADFDGDQMAIHVPLSDEAQAEARLLMLAAHHIL
SPRDGEPIVAPSQDMVIGNYYMTTEDKAREGEGMIFKDANEAYMAYKDGFVALQTRVGVQ
VSSMPKKPFTDEQRNQIMVTSVGKLIFNGIMPEDYYYINEPTNDNLLNGVPDKYFLDKGE
DIHAYLENAPLVPPFKKGFLSDIIAEVYKKYKVTKTSQFLDRIKDLGYYESTISGVTVGI
ADITDLKEKPAIIENAHKQVALVTKQFRRGLITDDERYERVIGIWNDAKDEVQNKLIEHM
DIHNPINMMSDSGARGNISNFTQLAGMRGLMAAPNGKIMELPVLSNFREGLSVLEMFLSS
HGARKGMTDTALKTANSGYLTRRLVDVAQDVVVREKDCGTDRGLDVAAITEGNEMIEPLY
DRILGRYTMKSVFDPETGEKICDKNVLVDEEMAQKIVDAGVKKVTIRSAFTCNTEHGVCE
RCYGRNAATGDKVEAGEAVGTVAAQSIGEPGTQLTLRNFHTGGVAGNDDITQGLPRVQEI
VEARNPKGKATISEVTGEVQSIEENPAERTKDVTIAGENDTRTYTLPITARLKVEEGDYI
HRGMQLNEGSIDPKELIRVRDVLSTETYLLAEVQKVYRMQGIDLLDKHVEIMIRQMMRKV
RVMDPGDTDLLPGELMDISQFRDANRDTLVAGNIPATSRPVILGITKAALETNSFLSAAS
FQETTRVLTDAAIRGKNDPLVGLKENVIIGKLIPAGTGMSNYRNIKPKEVAVAADAPMKS
TSDIEAEMKKQK |
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| NT seq |
3639 nt +upstreamnt +downstreamnt
ttgattgacgtcaataaatttgaaagcatgcagatcggtctggcctcaccacaaaagatc
cgcagctggtcgtacggggaagttaaaaagccggaaacgatcaactaccggacgctgaag
ccggaaaaagacggtctgtttgacgaacgaatctttggtccaaccaaggattacgaatgt
gcttgtggcaaatacaagcggattcgtttcaagggccgcgtttgtgaccgctgtggagtt
gaggttaccagctctaaggtacgtcgcgaacggatggggcacattgagctggccgcccct
gtttctcacatttggtacttcaagggtatccctagtcgaatgggcctggtcttggacatg
agcccacgtgccctggaagaagttatctactttgcttcttacgttgttttagatgccggt
gatacgccactggaaaagaaacaattgctctctgaagcggaatatcgtgaaaagaaggaa
gaatacggcgatcgttttactgctgaaatgggtgctgaagccattcaaaaactgttggct
gacgttgacctggaaaaggaagcaaccgaattaaaagccgtcttgaaagaagctactggc
caaaagcggacgcgcgccgttcgtcgtttggacattctggaagccttcttaaagtctggc
aacaagccagaatggatggttatggacgttattccagttatgccacctgatttgcggcca
atggtacaactggaaggtggccgttttgcaacttctgatttgaatgatctgtaccggcgg
gttatcaaccgtaacaatcgtctgaagcggctgttggaattgaacgcgcctggcatcatt
gttcaaaacgaaaaacggatgctgcaggaagccgttgatgccctgatcgataacggtcgt
cgtggtcgtccggttgctggtcctggtaaccgtccattgaagtcgctgtcgcacctgctg
aaaggtaagcaagggcgtttccgtcaaaacctgctgggtaagcgtgttgactactctggt
cgttcagttatcgatgttggtcctaacctgaagatgaaccagatggggctgccagtacca
atggcaatggaactgttcaagccatttatcatgcatgaattgaccaagcggggcctggct
accaacgtcaaggctgctaaacgcttgatcgataagcgtgacaacaaggtcttcgatgtc
ttggaagacgttatcagtgaacacccagttctgcttaaccgggcacctactctgcaccgt
ttgggtattcaagcctttgaaccggtattggtatctggtaaggcaatgcggttgcaccca
ctggtttgtgctgcctacaacgccgactttgacggtgaccaaatggctattcacgttccg
ctgtctgatgaggcacaagctgaagcccgtctgctgatgcttgctgctcaccatatcctg
tcgcctcgtgacggtgaaccaatcgtggcaccttctcaagatatggttatcggtaactac
tacatgacgaccgaagataaggctcgtgaaggcgaaggcatgatcttcaaggatgcaaat
gaagcctacatggcctacaaggatggctttgttgccctgcagacgcgggttggggttcag
gtttcttcaatgccaaagaagccatttactgatgaacagcgcaatcagatcatggttacc
agtgttggtaagctgatcttcaacggcatcatgccagaagactactactacatcaatgag
ccaaccaatgacaatctgctgaatggtgttcctgacaagtacttcttggataagggtgaa
gatattcacgcctacttggaaaatgcaccattggttccgccatttaagaagggcttcttg
tccgatatcattgccgaagtctacaagaagtacaaggttaccaagacctcgcaattcctt
gaccgcatcaaggatctgggttactacgaatccacgatttctggtgttaccgtggggatt
gccgatattaccgacttgaaggaaaagccggcaatcatcgaaaatgctcataagcaggtt
gctttggttaccaagcagttccgtcgtggtctgattactgatgatgaacgttatgaacga
gttatcggcatttggaatgatgctaaagatgaagttcaaaacaagctgattgaacacatg
gatattcacaacccaatcaacatgatgtctgactcgggtgctcgtggtaacatctccaac
tttactcagctggccgggatgcgtggtctgatggccgctcctaacggtaagatcatggaa
ctgccagtcctttcaaacttccgtgaaggtctttcagttctggaaatgttcttgtcatct
cacggcgctcgtaaaggtatgactgatacggcccttaagactgccaactcaggttacttg
actcgtcgtctggttgatgttgcccaagacgtggtcgttcgtgaaaaagactgtggtact
gatcgcggtctggatgttgccgcaattactgaaggcaatgaaatgatcgagccgctttac
gatcggattctgggtcgctacacgatgaagtccgtctttgatccagaaactggcgagaag
atctgtgataagaacgtcttggttgacgaagagatggctcaaaagatcgttgatgctgga
gttaagaaggtaacaatccgctcagccttcacttgcaacactgaacacggtgtctgcgaa
cgctgctacggtcgtaacgctgctactggcgacaaggttgaggccggtgaagccgttggt
acggttgctgctcaatcaatcggtgaaccaggtactcaattgacgctgcggaacttccac
actggtggggttgctggcaacgacgatatcacgcaaggtcttcctcgtgtgcaagaaatc
gtggaagcacggaatcctaaaggtaaggcaacgatttctgaagttaccggtgaagttcaa
tcaatcgaagaaaacccagctgaacgaaccaaagacgttacgattgctggtgagaacgac
acgcggacttacacgctgccaatcacggctcgtcttaaggttgaagaaggcgactacatt
caccgtgggatgcaattgaatgaaggttcgattgatcctaaggaactgatccgcgttcgc
gacgttctgtctacggaaacctacctgttggctgaagttcaaaaggtttaccggatgcag
ggtattgatctgctcgacaagcacgttgaaatcatgattcgtcaaatgatgcgcaaggtt
cgtgtcatggatcctggtgatactgatcttttgccaggtgaattgatggatatcagtcaa
ttccgcgatgccaaccgtgatacgctggttgccggcaacattccggcaacgtcacgtccg
gttatcttgggaattactaaggctgccttggagaccaacagtttcctgtcagcagcctcc
ttccaagaaacaactcgtgtcttgacggatgctgctattcgtggcaagaacgatccactg
gttggtttgaaggaaaacgttattatcgggaagctgattcctgctggtactggtatgagc
aactaccgcaacatcaagccaaaagaagttgctgtagctgccgatgcaccaatgaaatca
accagcgatatcgaagccgaaatgaaaaagcaaaagtag |
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