Limosilactobacillus mucosae: LBLM1_02730
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Entry
LBLM1_02730 CDS
T03814
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lmu
Limosilactobacillus mucosae
Pathway
lmu03030
DNA replication
lmu03410
Base excision repair
lmu03420
Nucleotide excision repair
lmu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBLM1_02730
03410 Base excision repair
LBLM1_02730
03420 Nucleotide excision repair
LBLM1_02730
03440 Homologous recombination
LBLM1_02730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmu03032
]
LBLM1_02730
03400 DNA repair and recombination proteins [BR:
lmu03400
]
LBLM1_02730
Enzymes [BR:
lmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBLM1_02730
DNA replication proteins [BR:
lmu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LBLM1_02730
DNA repair and recombination proteins [BR:
lmu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LBLM1_02730
NER (nucleotide excision repair)
GGR (global genome repair) factors
LBLM1_02730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AJT50094
UniProt:
A0A0D4CJ72
LinkDB
All DBs
Position
561178..563841
Genome browser
AA seq
887 aa
AA seq
DB search
MAEKMLLIDGNSIAFRAFFAMHNQIDKFTNQNGLHTAAIYGFKLMLDHVLANYQPDKALV
AFDAGKQTFRTEMYADYKGGRAKTPTELTEQLPYLHEMMHACGIKTYQLANYEADDIIGT
LARLGDQAGDETLIVTGDRDLTQLVTDNTTVAVTIKGVTQTEMYTPAHFQEKFGVTPTQF
IDMKALMGDSSDNYPGVTGIGEKTAQKLIQEYGSLDGLYENIDQMRKSKRKENLVNEEKI
ARECKDLATIRRDAPLTIGLDDLKYQGVQTEELIKFYQEMNFKSFLSKMNVAPSTEEATD
AKEIAYTELTADNLDLLADLDHHVTFQLEMPNENYHLSTFAGFVIGDGQKWLVSRDESLL
QTAPVKKILTSDQYTKDVFNAKAQIVGLHRLGIDLNYVAFDLLLASYLVDPSDNSNDLGE
LAHAHDYYDVKSDEEVYGKGVKRAIPTDDQVFFTHLAQKARAIHELRAPVYAQLKEHEQM
PLYEDIELPLTYVLAKMEIAGIKVNAQTLKEMGSKLKERLAEIEQVIYQEAGTEFNINST
KQLGEILFDKMKLPVIKKTRTGYSTAVAVLEKLQGYSPIIGHILEYRQIAKLQSTYIEGL
LKVIHSSDQKIHTRYLQTLTATGRLSSVDPNLQNIPVRLEEGRQIRRAFVPSEPGWKIFS
SDYSQIELRVLAHITGDKNLQQDFIDGKDIHESTARRIFHLLPGEAVTPDMRRHAKAVNF
GIVYGISDYGLSQSIHVTRKQAHEFIESYFEEFPGVKKYVTEIVKSAHEKGYVETLTHRR
RYLDDIHSKNFAKRSFAERTAMNTPIQGSAADIIKIAMINMDKMLRAHNLKARMLLQIHD
ELVFEAPAAEIPTLEKLVPQVMDSAFKLDVPLKVESKYGDTWYDLKK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaaatgttgttgattgatggcaatagcattgcatttcgggctttttttgca
atgcataatcaaatcgacaaatttaccaaccaaaacggtcttcatactgcggcaatctat
ggctttaagttgatgctggatcacgtgctggcaaactatcagccggataaggctctggta
gcgtttgatgctggcaagcagacttttcgaacggaaatgtatgctgactacaagggtggt
cgggccaaaacgccaactgagctgactgaacagctgccgtatctgcacgagatgatgcat
gcctgtgggatcaagacctatcaattagccaactatgaagccgacgacattatcggtacc
ctggccagactcggcgatcaggctggtgatgagaccctgatcgtaactggcgaccgggat
ctgacacagctggtaactgataacacgacggttgccgtaacgattaaaggcgtgacgcag
accgaaatgtacacgccggctcattttcaagaaaaattcggcgtgacgccaactcagttt
atcgatatgaaggcgctgatgggtgacagttccgacaattatccaggggtcacgggcatc
ggcgaaaaaaccgcgcagaagctgattcaagaatatggctcgctggatgggctttacgaa
aatatcgatcagatgcgcaagtcaaagcggaaagaaaatctggtcaatgaagaaaaaatt
gcccgtgaatgtaaggatctggccacgatacgccgtgatgctccactgacgatcggtctg
gatgatttgaagtatcaaggcgtgcagactgaagaactgatcaagttttatcaagaaatg
aactttaagtcgtttctaagcaagatgaacgttgcgccaagtactgaagaagccacggat
gcaaaagaaatcgcatatactgaactgacggctgacaatctggatcttttagcagattta
gatcatcacgtaaccttccagctggaaatgccaaatgaaaattatcatctttcaacgttt
gccggctttgtaatcggggatggtcaaaaatggctcgtcagtcgtgacgaaagcctgctg
cagaccgcgccagtcaaaaagattttaaccagcgatcaatatacgaaagacgtttttaat
gccaaagcacagatcgtcggcctccaccgattgggaattgacttgaactatgtggcgttt
gatctgctgctggcttcttatctggttgatccgagcgataacagcaatgatcttggcgag
ctggcccatgcccatgactattatgacgtcaaaagcgatgaagaggtttatggcaagggc
gtcaaacgagcaattccaactgacgaccaggtcttctttactcatttagcacaaaaagcc
cgggccattcacgagctgcgcgccccagtctatgcccagcttaaggaacatgagcagatg
ccgctttatgaagatatcgagctgcctttaacctatgtcttggctaaaatggagattgct
ggtatcaaggtcaacgcacagacgcttaaagagatgggcagcaagttaaaggagcgctta
gccgaaatcgagcaggttatctatcaagaagcaggtacggagtttaacattaactccacc
aaacagctgggcgagattttgtttgacaagatgaaactgccggttattaaaaagacgcgt
actgggtattccacggctgttgcggttttagaaaagctgcagggttattcgccgattatt
ggtcatatcttggagtatcggcagatcgccaagctgcagtcgacttatatcgaaggactg
ctgaaagttattcacagcagcgaccaaaagatccatacccgctatctgcagacgctgacg
gcaaccggccgcctgtcttcagttgatccgaacctgcagaatattccggtgcgcttggaa
gaaggtcgtcagattcggcgggcgttcgtgccaagcgagcctggctggaagattttctct
tctgactactcacagattgagctgcgggtcttggctcatattaccggcgacaagaacctg
cagcaggattttattgatggcaaggatattcacgaaagtacggcacgacgtattttccat
ctgctgccgggcgaagcggttacgcctgatatgcgtcgtcatgccaaagcggtcaatttc
gggatcgtttacggcatcagcgactatggcctctcacaaagtattcacgttacgcgcaag
caggcccatgaatttatcgaaagctactttgaggaatttcctggcgtcaagaaatacgtc
acggagatcgtcaaatcggctcacgaaaaaggctatgtcgaaacgctgacgcatcggcgg
cgctatttggatgatatccattccaagaattttgccaagcgctcatttgccgaacgaacc
gcgatgaacacgccaattcaaggcagcgcggccgacatcatcaagattgctatgatcaat
atggacaagatgctgcgggctcataatcttaaggcacggatgcttttacagattcatgac
gaactggtctttgaggcgccggctgcagagattccgactttggaaaaactggtgccgcag
gtcatggattcggccttcaagctggacgtaccgctaaaggttgaaagtaagtatggcgac
acctggtacgatctgaaaaaataa
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