Limosilactobacillus mucosae: LBLM1_02735
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Entry
LBLM1_02735 CDS
T03814
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lmu
Limosilactobacillus mucosae
Pathway
lmu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LBLM1_02735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmu03400
]
LBLM1_02735
Enzymes [BR:
lmu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LBLM1_02735
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LBLM1_02735
DNA repair and recombination proteins [BR:
lmu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LBLM1_02735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF1451
FDX-ACB
Zn_ribbon_8
DZR
Auto_anti-p27
TniQ
Motif
Other DBs
NCBI-ProteinID:
AJT50095
UniProt:
A0A0D4CJL7
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All DBs
Position
563975..564814
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AA seq
279 aa
AA seq
DB search
MPEMPEVETVRRGLMNIAAGRKIQGIDVYYGKTIENDIEKFRQALIGQTIERIDRRGKYL
LFRFTNNLTMVSHLRMEGSYYRQLNDGPIDKHTHVVFHFTDGTELCYRDTRKFGRMRLVK
TGEEMQVGGLKTMGPEPTTKDFKVDYFKRILKKSRSKIKPFLLNQDHVAGLGNIYCDEVL
WQSRINPEQPANTLTDEQIQILHDNIIKEIAKATKYKGTTVHTFMNAFGEAGAFQNQLEV
YGRGGEKCERCGHKLVKIKVAQRGTTFCPRCQAWAGDQK
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgccagagatgccagaagtagagaccgtacgccgggggttgatgaatattgccgcgggc
cgtaagattcaaggaattgacgtttactatgggaaaacgattgaaaacgacatcgagaag
tttcggcaagccttgattggtcagacgattgaacggattgatcggcggggcaagtatttg
ctgtttcgctttaccaataatctgaccatggtttcgcatttgcggatggaaggaagctat
tatcgccagctcaatgatggtccaatcgacaagcatacgcatgtagttttccattttacg
gatggtacggagctttgctatcgcgacacgcgcaagtttggccgcatgcgcttggttaaa
accggtgaagagatgcaggtcggcggcttaaaaactatgggaccggaaccaaccactaaa
gactttaaggttgactattttaaacgaatcttgaaaaagagccgcagcaaaatcaagccg
tttttactaaatcaggatcacgttgccgggctgggtaatatttattgcgacgaggttctt
tggcagagccgcatcaatcccgaacagccggctaatacgctgactgacgagcagattcag
attctgcatgacaacatcatcaaagagattgccaaagcgactaaatacaaggggacgacc
gtgcatacgtttatgaatgcctttggcgaagccggcgcctttcaaaatcaactggaagtt
tatggccgtggcggcgagaaatgcgaacggtgcggccataaactggttaagatcaaggta
gcgcagcgtggcacgactttttgtccgcgttgtcaggcttgggcaggtgatcagaaatga
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