Limosilactobacillus mucosae: LBLM1_06715
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Entry
LBLM1_06715 CDS
T03814
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lmu
Limosilactobacillus mucosae
Pathway
lmu03030
DNA replication
lmu03430
Mismatch repair
lmu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBLM1_06715 (dnaE)
03430 Mismatch repair
LBLM1_06715 (dnaE)
03440 Homologous recombination
LBLM1_06715 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmu03032
]
LBLM1_06715 (dnaE)
03400 DNA repair and recombination proteins [BR:
lmu03400
]
LBLM1_06715 (dnaE)
Enzymes [BR:
lmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBLM1_06715 (dnaE)
DNA replication proteins [BR:
lmu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LBLM1_06715 (dnaE)
DNA repair and recombination proteins [BR:
lmu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LBLM1_06715 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
HROB
CCT
Motif
Other DBs
NCBI-ProteinID:
AJT50727
UniProt:
A0A0D4CKP4
LinkDB
All DBs
Position
complement(1451160..1454486)
Genome browser
AA seq
1108 aa
AA seq
DB search
MEIVPLNVISTYSLLQSPLRPTELVQGAKSRGYRAVALADWNVMYGAIDFYNAAKAAGIK
PLLGLRLHLKTMAMTTQGLEVLFLARTQAGYVNLMQLSTLKQTQAQGRFLTQQEIEPFLT
DLDLILPAQPLTLDQTMIDQWLPALIEKTAGHCWLGVDLELDAIQREQIRQTARQYAVSL
VAAPKIEYLENDDAFATDVLRHIDEGAKMTNPFFQAQNTISHALPTREQLQQAFLDSEFE
GAAAQTAIIAQECNVEIKFQMPILPKFPTPNQQSAADYLKQLCLAGLKKRPLAAGYSPID
YEKRLQRELTTIHEMGFDDYFLIVWDVMRFAHQKKLATDPGRGSAAGSLVAYVLEITEVD
PLKYQLLFERFLNPERAQMPDIDLDLPDNRRDEVLQYVHQKYGHARVAQIITFGTFGAKQ
AVRDVGRVFGMPVYAIDELARAIPNLPKITLQQALSESRALNNLLSDSAQNALLMKTALR
IEGLPRHYSTHAAGVVLSQAPLNQLVPLQNGSDGLLMTQFPKDTVEALGLLKMDFLGLRN
LSIMDSALQLIEKSQPDFDLHQINLNDPLTLKLFQKGATGGIFQFESSGIRQVLIRLHPE
NFEMIVAVNALYRPGPMDNIAHFIARKEGREKVTLPDPSLASILAPTYGILVYQEQVMQL
AAKMAGFTLGQADLLRRAMSKKKADVMERMRGRFIKGAVANGYSRPVAEQVFEYIDRFAN
YGFNRSHAVAYSMMAFEMAYLKCHFAPAFFAALLNAHAGSEKMRAYFEDAKSFGVVIAGP
SINFSQADFSLYQGRVLFGLSMIKGVRRDLISEILLKRKDGQFASLADFIGRIDVRFRKP
ELIAPLIYAGAFDRLGSNRAEMIDALADLIEGAEFNQALLGSDTFQTMIPARPEYPLAQR
LEKEHEYLGVYLSGHPVSQYRSLAGQLHAVTVAQLKEGMNATLILYVSRVKTINTKKTRQ
PMAFVSTSDETGSIEATVFPKQFQRYQELIAARNVLIISGRVENRNGSLQLLASRIQLAS
SAGERGSAPAKTRWFLQLRKNALTPRLTAQLQEFISSHHGNVPVMVYYPETRQTRLLPRS
QWLSGDEATKKGLIDLLGVSNVVYQSTS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgtgccgctcaacgtgatcagcacatacagtctcttgcagagtccgctgcgc
ccgactgaattggttcaaggagccaaaagcaggggctatcgggcggttgccttggctgac
tggaacgtgatgtatggggcaattgatttttataatgctgccaaagcggcgggcattaag
cctttgctggggttgcggctgcatttgaaaaccatggcaatgaccacgcagggcttggaa
gttttgtttttggcccgtacgcaggctggctacgttaacctgatgcagctgtcgacctta
aagcagacacaagcacagggacgttttttgacgcagcaggagatcgagccgtttttaacg
gacctggatctgattttgcctgctcagccgctgacgcttgatcaaacgatgattgaccaa
tggctgccggcgctgattgagaagacggcagggcattgctggctgggggttgatctggag
cttgatgccattcagcgcgaacagattagacaaacggcgcgacaatatgccgtttcactg
gtagcagcccctaaaatcgagtatctggaaaatgatgatgcctttgcgaccgatgtttta
agacatattgatgagggtgccaaaatgaccaatccgtttttccaggctcagaatacgatc
agtcacgccttgccaaccagagaacagctgcagcaggcctttttggattctgaatttgaa
ggtgcggctgctcagacagcgatcatcgcgcaggaatgcaatgttgagatcaagtttcaa
atgcctatcctgcctaagtttcctacgccaaaccagcaaagcgcggccgattatctaaag
cagctttgtttggcaggtctgaaaaagcgtccattggcagctggctattcgccaatcgat
tatgagaagcgcctgcagcgtgaactgaccacgattcatgaaatgggctttgatgattat
tttctgattgtctgggacgttatgcgctttgcccaccaaaaaaagctggcgactgatcca
gggcgtgggtcggcagctggctcgctagtggcctacgtgttggagattactgaagtcgat
cccctaaaataccagctgcttttcgaacggttcttaaatccagaacgagctcagatgccg
gatatcgacttggacctgccagataatcggcgtgatgaggttttgcaatacgttcatcaa
aaatatggtcatgccagagttgctcagatcattacctttgggacgttcggtgctaagcag
gccgtcagagacgtgggccgcgttttcggtatgccggtctatgccatcgacgaactagcc
cgagcgattcccaacctgcctaagattacgctgcagcaggcattgagcgaatcacgggct
cttaataatctgctcagtgattctgcgcagaacgcacttttgatgaagacggcactccgt
attgagggactgcccagacactactcgacgcatgcggctggagtcgtcttgtcgcaagca
ccattgaatcagctggttccgttgcaaaacggcagcgatggcctcttaatgacgcagttt
cctaaagacacggttgaggcactgggacttttgaagatggatttcttgggcctgcgcaat
ctgtcaatcatggattcagccctgcagctgattgaaaaaagccagcctgactttgacctg
catcagatcaatctcaacgatccgctgactttaaagctgtttcaaaaaggagcaacggga
gggatctttcagtttgagtcaagcgggattcgtcaggtcttgattcggctgcatccagaa
aactttgagatgatcgtagcagtcaatgccttatatcggcccggtccaatggataacatt
gcccattttattgcacggaaggaagggcgtgaaaaggtcactttgcctgatccttcattg
gcatcgattctggcaccgacttacggcattctggtgtatcaagaacaggtaatgcaactg
gccgctaaaatggcgggtttcactttaggacaggccgatctgctgcgccgtgccatgagt
aagaaaaaagccgatgtgatggaacggatgcggggacgctttattaaaggagcagttgcc
aatggttattccagaccggttgctgaacaggtttttgaatatattgatcggtttgccaat
tacggtttcaaccgttcacatgccgtggcctactcaatgatggcttttgaaatggcctat
cttaaatgtcactttgcgccggctttttttgccgcgcttttgaatgctcacgcgggatca
gaaaagatgcgggcctattttgaggatgccaaatcatttggcgttgtcattgccggcccc
agcatcaattttagtcaggctgattttagtctgtaccaaggacgcgtcttgtttggtctg
tccatgatcaagggcgtgcgtcgtgatctgatcagcgagattctcctaaaaagaaaggat
ggtcagtttgccagcctggctgattttatcggccgcattgacgtcagatttagaaagcct
gagctgattgcaccgctgatctatgccggtgcgtttgatcgtttgggcagcaatcgtgct
gaaatgattgatgctttggctgatttaattgaaggtgccgagttcaaccaggcgctttta
ggcagcgacacctttcaaacgatgattccggctcgtcctgagtatccgttggcccagcga
ctggaaaaagagcatgagtatctgggcgtgtatctgtcaggacacccggtcagtcaatat
cgatcattggctggtcagctgcacgcggttacggtcgcccagctaaaagaagggatgaac
gcgaccctgattctctacgtcagccgcgttaaaacgatcaataccaaaaaaacgcgtcag
ccgatggcattcgtcagtacctcagatgaaacgggcagcattgaggcaaccgtttttccc
aaacagtttcagcgttaccaagaactgatcgctgcacgtaatgttttgattatcagcggt
cgggtagaaaatcgtaacggcagtctgcagctgctggccagtcgcattcagctggcctct
tctgctggtgagcgtggatcggcgccagctaagacgcgctggtttttgcagctgagaaag
aatgcgctgacgccgcgcttgaccgcccagctgcaggaatttatcagcagtcaccatggc
aacgtgccggtgatggtctactatcccgaaacgcggcagacgcgtctgcttccgcgcagt
cagtggctcagtggggatgaggcgactaaaaaagggctgattgatcttttgggagtcagc
aacgtggtctatcaatccacgtcgtaa
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