Limosilactobacillus mucosae: LBLM1_07165
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Entry
LBLM1_07165 CDS
T03814
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lmu
Limosilactobacillus mucosae
Brite
KEGG Orthology (KO) [BR:
lmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmu03016
]
LBLM1_07165
Enzymes [BR:
lmu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LBLM1_07165
Transfer RNA biogenesis [BR:
lmu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LBLM1_07165
Prokaryotic type
LBLM1_07165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TelA
Motif
Other DBs
NCBI-ProteinID:
AJT50801
UniProt:
A0A0D4CLP0
LinkDB
All DBs
Position
complement(1563501..1564394)
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AA seq
297 aa
AA seq
DB search
MDGIIPLYKERGMTSFDCVSRLRRILHTKKIGHSGTLDPNVDGVLPICVGQATKVVEFLM
ASGKQYVGELLVGQATTTQDLDGEVVAQKPVTAPIDEDTIKQAMQELTGDIVQIPPMYSA
IKVNGKKLYEYARAGETVERPKRHVHIARFEMTASSYDEKKQQQRIRFVVDCSKGTYVRT
LAYDLAEKLGYPGVMSSLTRTKSGGFELDQTLSLSDIQDAMEAQIMDRYVYPMDYALQNY
PHLELTEAQWKKVQNGGWLSGLNTQEPEIALTYQGEVKALYQAKDRLYKPLKMLSTK
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
ttggacgggattattccattgtacaaagaacgcggcatgaccagctttgactgtgtcagt
cggttgcggcgaattctgcacacgaaaaaaatcggtcattcaggaacgctggatccaaac
gttgatggcgtcttgccgatctgcgtgggtcaggctaccaaagtcgttgagtttttgatg
gcctcgggtaagcaatatgttggcgagcttttagttggtcaggcgacgacgactcaagat
ctggatggcgaagtcgtggcccaaaagccagtcacggcaccaattgatgaagacacgatc
aagcaggccatgcaggagctgaccggtgacattgttcagattccgccgatgtattcggca
atcaaggttaatggcaagaagctctatgaatatgcccgcgctggcgaaaccgttgaacgt
cccaagcgtcacgttcacattgcgcgctttgaaatgacggcttccagctatgatgaaaaa
aagcagcagcagcggattcgttttgtggtcgactgcagcaagggaacctacgtgcggaca
ttggcctatgatctggcagaaaagttaggctatcctggcgtaatgagcagtctgacacga
actaagagtggcggctttgaattggatcagaccctgagtctaagcgatattcaagatgcc
atggaagcccagattatggatcgctatgtctatccaatggactatgccttgcagaactat
ccacatcttgaattgacggaagcgcaatggaaaaaggttcaaaacggcggctggctgagc
ggtctgaacacccaagaacctgagattgcattgacttatcaaggcgaggtcaaggcactg
tatcaggcaaaagatcggctctataaaccgctgaagatgctgtcgacaaagtag
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