Limosilactobacillus mucosae: LBLM1_07200
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Entry
LBLM1_07200 CDS
T03814
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lmu
Limosilactobacillus mucosae
Pathway
lmu03030
DNA replication
lmu03430
Mismatch repair
lmu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBLM1_07200 (polC)
03430 Mismatch repair
LBLM1_07200 (polC)
03440 Homologous recombination
LBLM1_07200 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmu03032
]
LBLM1_07200 (polC)
03400 DNA repair and recombination proteins [BR:
lmu03400
]
LBLM1_07200 (polC)
Enzymes [BR:
lmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBLM1_07200 (polC)
DNA replication proteins [BR:
lmu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LBLM1_07200 (polC)
DNA repair and recombination proteins [BR:
lmu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LBLM1_07200 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
RNase_T
DNA_pol3_a_NII
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
T2SSK
HHH_3
DEDDh_C
PolyA_pol
RNase_H_2
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AJT50807
UniProt:
A0A0D4CKV9
LinkDB
All DBs
Position
complement(1569684..1574021)
Genome browser
AA seq
1445 aa
AA seq
DB search
MELSRHELFEHLLDQLNIAKDDPAFKDGKIKQVIVHRKSKCWEFDIVLRKVMPYELFRQF
VSALQISFRELAGVDAKVRIDTPTDELDAKAIGDYWSYVVDAEVGESPMAREVCAKTIPE
VDGNRVQLLLENEAIKDFFVKNLLSAIEEGYQKVGFPQFRIHPLVDQSASEQKIKELKAK
QQQQDQELVKKAMERLQQQKAEKKQQESALPDLGDGPLVIGKPINPKEPVRRMAEITEEE
RNVVVEGYVFSKEVRELRSGRQLLILEVTDYTSSFAIKKFSNNKEDEAKFAAIKEGEWIK
ARGPVQEDTYMRDLTIMAYAIQQVSHPARKDTAEGEKRVEMHLHTTMSTMDATNSISDYI
KQAEKWGMKAIAVTDHAGVQAFPEAFNASHDKKGNAKIKILYGVEANVVDDGIPLVYNEN
HDELLGNTYVIFDVETTGLSAIYDKVIQLSAVKMRDGEVLDSFNQFIDPGFPLSEQTKEL
TKITDEDVKGSKSETEVFQMFQDFCEGCLLAGHNVSFDMGFLNTGYERDGLPRITAPVID
TLPLARFLHPEMHRFTLDTLSRKFKVGLDHHHRADHDAEATGHLLHIFLRDAEKRYDAKY
VDDLNKHMADNGAYRHGRPFHATIFAKNHTGLKNLYKLVSLANVKYFYRVPRIPRSVLDH
YRDGLLIGTACSKGEVFTAMMEKGYTDAKQKAQYYDFIEVQPKPNYAPLIEQQIISNTAH
LEDIIKNMVKLGADMDKPVVATGDAHYLNPEDKIYRHILINSQGGANPLNRTRRPDVPFR
TTDDMLKQFAFLGEEKAHEIVVENTNRLAAEMDEMRPVQDSLHTPNMKGANEELAKRTWD
TAHAWYGDPLPKLVKDRVELELNSIIGNGYAVIYLIAQRLVAKSNKDGYLVGSRGSVGSS
VVANLAGITEVNAFPPHYRCPNCQYSHFYTKGEYSSGFDMPDKDCPKCGTLMIKDGHDIP
FQTFLGFKGNKVPDIDLNFSGDYQPIAHNYMKVLFGEKNVYRAGTIGTVADKTAYGYVKA
FERDTEQQFRGAEEDRLAKGATGVKRTTGQHPAGIIIVPDDMSIYDFTPVQYPADDQNAA
WETTHFDFHSIHDNILKMDILGHDDPTMIRFLQDLSGVNPQTIPMDDPGVMSLFSSPDIL
GVTEEQIQSKTGTLGLPEFGTRFVRGMLDDTHPKNYSQLLQISGLSHGTGVWLDNAQELI
KNGTATIANVIGCRDNIMTDLIHYGLDSETSFQVMEHVRKGRGIPDEWQEKMLQAGVPQW
YLDSCLKIQYMFPRAHAAAYVLMALRIAYFKVYFPLVYYAGYFSVRADDFDVVAMAHGKD
AVKARMQQINDQGNEASAKDKSLLTILELANEMLERGYNFEMVDLNRSDATDWLIDGDSL
IAPFRAIPGLGVNVAKQIVAARAQRPFLSKEDLSERGKVSQTLIQFMTANHVLDDLPDEN
QLSLF
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
gtggagttatcacgacatgaactgtttgagcacttgctggatcagctgaacatagctaaa
gacgatcctgcttttaaagacggcaagatcaagcaggtaatcgttcaccgcaagtccaag
tgctgggaatttgatatcgtcctgcgcaaggtaatgccttatgaattgtttcgccagttc
gtctcagctttgcagatcagttttcgcgagctggcgggcgtggatgccaaagtcagaatc
gatacgccgactgatgaattggatgctaaggcgatcggcgactattggtcatacgtagtc
gatgccgaagtcggtgaatccccaatggcacgcgaggtctgcgccaagacgattcctgaa
gtcgatggcaaccgagtgcagctgctgctggaaaacgaggctatcaaagactttttcgtt
aagaatcttttaagtgcaattgaagaaggctatcaaaaagtcggttttccacagtttcgg
attcatccattggtcgatcagtcagcttccgagcaaaagatcaaggaactcaaggccaaa
cagcagcagcaggaccaggagctggttaaaaaagccatggagcgcctgcagcagcaaaag
gccgaaaaaaagcagcaggaatccgcgctgcctgacctgggcgatggtcccctggtcatt
ggcaagccgatcaatcctaaagaacccgtacgacggatggctgagattactgaagaagag
cgcaacgtggtcgtggaaggctatgtcttttcaaaagaagtccgtgagctgcgcagtggc
cggcagttgctgattttggaagtaaccgactacacgtcatcgtttgccattaagaagttc
tccaacaacaaagaagacgaggccaagtttgcggcaatcaaagaaggcgagtggatcaag
gcacgcggtccggttcaggaagacacctacatgcgtgatttgacgatcatggcctatgcc
atccagcaggtcagtcatcctgccagaaaggatactgcagaaggcgagaagcgggttgaa
atgcatctgcatactacgatgagcacgatggatgccaccaactcgatttctgattacatc
aaacaggcagaaaaatggggaatgaaggcaatcgcggtcaccgatcatgccggcgtccag
gcgttccccgaagcgtttaatgccagccacgacaaaaagggcaatgccaagatcaagatt
ttatatggggtcgaggctaatgtcgttgatgacgggattccgctggtctataacgaaaac
catgatgagcttttaggcaatacctatgtcatctttgacgtggaaacgacgggactttca
gccatctatgacaaggtgatccagctgtcggccgttaagatgcgggatggcgaggtgctg
gactcgtttaatcagtttattgaccctggctttccgctttctgaacagactaaggaactg
accaagatcactgatgaggacgttaagggatccaaatcggaaactgaggtctttcagatg
ttccaggacttttgtgaaggctgtctgctggctggacacaacgtcagctttgacatgggc
tttttgaataccggttatgaacgcgatggcttgccgcgcattacggctccggttatcgat
accctgccgctggcgcgcttcttgcatccagaaatgcaccggttcacgctggatacgctg
agccgcaagtttaaggttggtcttgatcatcaccaccgggccgatcatgatgccgaggca
acgggacatctgctgcacatctttttaagagatgccgagaagcgctacgatgccaaatac
gttgatgacttaaacaagcatatggcggacaatggcgcctatcgtcatggccgaccgttt
catgccacgatttttgccaagaatcacacggggctgaagaatctttacaaactggtctca
ttggctaacgtcaaatacttctatcgggtgccgcggattccgcgcagcgtgctcgaccac
tatcgcgatggcctgctgatcggtacggcctgttcaaaaggcgaggtctttactgcaatg
atggaaaagggctatacggatgccaagcaaaaagcgcagtactatgactttattgaagtg
cagcccaagcctaactacgcgccattgatcgagcagcagatcatctcaaataccgcgcat
ctagaagacattatcaaaaacatggtcaagctgggagcagatatggacaagccggtcgtg
gcaactggcgacgcgcactatcttaatccagaagacaagatctatcgtcatattctgatc
aattcgcaaggcggtgccaatccgcttaaccgtacgcgccggcctgacgttccattccgc
acgactgatgatatgctcaagcagtttgcgtttttgggtgaggaaaaggcgcatgagatc
gtggtagaaaataccaatcggctggctgctgaaatggatgagatgcggccagtgcaagac
tcgctgcacacgccgaacatgaagggcgccaacgaggaactggccaagcgaacctgggat
acggcccatgcctggtatggcgatccgttgccaaaactggttaaggatcgggtcgaactg
gagctcaactcaattatcggcaatggttacgcggttatttatctgattgcccagcgtttg
gtagccaagtccaataaagacggctatctggttggctcgcggggatcggtcggctcatca
gtcgtggctaatctggcagggatcacggaagtcaatgcctttccgccgcactatcgctgt
cccaactgtcaatacagccatttctacacaaaaggtgagtacagctcgggctttgatatg
cctgacaaagactgtcccaagtgcggtactttgatgatcaaagatggtcacgacattcct
ttccagaccttccttggctttaagggcaataaggttcccgatatcgatctgaacttctct
ggcgactaccagccaatcgcgcacaactatatgaaggtgctgttcggcgaaaagaacgtt
tatcgagctgggacgattggaaccgtggccgataagactgcctatggatacgtcaaggcg
tttgagcgcgacaccgagcagcagtttagaggcgccgaagaagaccgtttggcaaaaggc
gcgaccggcgttaagcgaacgactggtcagcacccggctggaatcatcatcgtgcctgat
gacatgagtatctacgactttacgccggtacagtatccagccgatgatcaaaatgcggcc
tgggaaaccacgcactttgatttccattcgattcatgacaacattttgaaaatggatatt
ctgggacatgatgatccgactatgattcggttcctgcaagatctttcaggcgtcaacccc
caaacgataccaatggatgatccaggcgtgatgagtctgttctccagtcccgatattttg
ggcgttactgaagagcagattcaaagcaaaacgggaactttggggctgccggaattcggg
acgcggttcgtacggggaatgctggatgatacgcaccccaagaactattcgcagctgctg
cagatttctggcctttcgcacgggactggcgtgtggctggataatgcccaggaactgatc
aaaaatggcacggccacgattgccaacgttatcggctgtcgtgacaacatcatgaccgac
ttgattcactatggtctggattcagaaacctccttccaggttatggaacacgtgcgtaaa
gggcgcgggattccagatgaatggcaggaaaaaatgctgcaggctggcgtgccgcaatgg
tatctggattcttgtctgaagattcagtacatgttcccaagagcgcacgcggcggcatat
gtcttgatggcgctgcggattgcgtactttaaggtctacttcccgttggtttattatgcg
ggctacttttccgtgcgggcggatgactttgacgtcgtggctatggctcatggtaaggat
gccgtcaaagcacggatgcagcagatcaatgaccagggcaatgaggccagtgccaaggac
aagagcctgctgacgattctggagctggccaacgagatgctggagcggggctacaacttt
gaaatggttgatctgaaccgttccgatgccactgactggctgattgacggtgattcactg
attgcaccgttcagagcgattcctggtttgggggtcaacgttgccaagcagatcgttgct
gctcgagcacaacggccattcctttccaaagaggatctttctgagcggggaaaggtctcg
cagacgctgattcagttcatgacggccaaccacgtcttagacgatctgccggatgaaaat
cagcttagtctgttttag
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