Limosilactobacillus mucosae: LBLM1_08320
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Entry
LBLM1_08320 CDS
T03814
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lmu
Limosilactobacillus mucosae
Brite
KEGG Orthology (KO) [BR:
lmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmu03019
]
LBLM1_08320
03009 Ribosome biogenesis [BR:
lmu03009
]
LBLM1_08320
Enzymes [BR:
lmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LBLM1_08320
Messenger RNA biogenesis [BR:
lmu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LBLM1_08320
Ribosome biogenesis [BR:
lmu03009
]
Prokaryotic type
rRNA helicases
LBLM1_08320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
AAA_30
Hydrolase
Wzy_C_2
Motif
Other DBs
NCBI-ProteinID:
AJT50965
UniProt:
A0A0D4CM04
LinkDB
All DBs
Position
complement(1769425..1770801)
Genome browser
AA seq
458 aa
AA seq
DB search
MTETFADFHFQPFLMEALKDLHFVKPTPVQEKVIPIVLANKSVVGQSQTGSGKTHAFLLP
IFEQLDAQNQNVQVVITTPSRELAYQIYNAAKQLNRFAPQKFTIHNYVGGTDKQHQIDQL
QRKQPQLVIGTPGRILDLINSQALDIHTAHRFVVDEADMTLDMGFLEQVDGIASHFPEDL
QMMVFSATIPQGLRPFLKKYMENPVVEEIPTETVINPNVDNWLMSTKGRDKNEMIYQLLT
LGDPYLALIFANTRQRAEEITDYLQQQGLKVALIHGGLEPRARKRIMRQIHNLDYQYVVA
TDLAARGIDIDGVSLVINDDIPSDLEYFVHRVGRTGRANMKGTAITLYAPAEDEMIAKLE
ERGIKFTPKTFKNGQIVTTYDRNRRKNYHRRKESLDTTLRGFVKKTKKKVKPGYKKRIQR
AIKEDEQEKRKLAKRHEMRKAKRQRQRQHRRERENNGR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaacatttgctgattttcattttcaaccttttttaatggaggccttaaaagat
cttcatttcgttaagccgacaccggttcaagaaaaagtgattccaatcgtgcttgccaat
aagagcgtggttggtcagtcccagaccgggagcggtaagacgcatgcttttttgctgccg
atttttgaacagctggacgctcaaaatcaaaacgtgcaggttgtaattaccacgcccagt
cgtgaactggcttaccagatctataacgcagccaagcagctgaatcggtttgcaccgcaa
aaatttacgattcacaattacgttgggggtaccgacaagcagcatcagattgatcagctg
caacgcaaacagcctcagctggtaatcggtacgccggggcgcattctggatctgatcaac
tcgcaggctttggatattcatactgctcaccgctttgtcgttgatgaagctgatatgacg
cttgatatgggctttttggaacaggttgacggcattgccagccattttccggaagacttg
cagatgatggtcttttcagcaacgattcctcaagggctgcggccatttttgaagaaatat
atggaaaatcccgtcgttgaagagattcctactgaaacggtaatcaatcccaatgtcgat
aactggctgatgtcgactaaaggccgcgataaaaatgagatgatctatcagcttttgacg
ctgggcgatccatatctggccttgatttttgccaatactcgtcagcgcgctgaagagatt
accgactacctgcagcagcaaggattaaaggttgccttgattcatggcggccttgagcca
agagcacgaaaacggatcatgcgccagattcacaaccttgactatcaatatgtcgttgcg
actgatctggctgcgcggggaatcgatattgatggcgtatcattggtaatcaatgacgat
attccaagtgatctggaatactttgttcaccgcgttggtcggacggggcgtgccaatatg
aaggggacggcaattacgctgtatgctccagcagaagacgagatgattgccaaattggaa
gagcgcggcattaaatttaccccaaagacgtttaagaatgggcagatcgtaacgacttat
gaccgtaatcgacggaaaaactatcatcgtcgcaaggaaagtctggatacgacgctgcgt
ggctttgtcaaaaagaccaaaaagaaggtcaagcctggctacaagaaacggatccagcgt
gcgatcaaagaagatgagcaggaaaaacgcaagctcgccaagcgtcatgaaatgcgtaag
gcaaaacgccagcgtcagcgtcagcatcggcgggagcgggaaaataatggtcgttga
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