Limosilactobacillus mucosae: LBLM1_08340
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Entry
LBLM1_08340 CDS
T03814
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lmu
Limosilactobacillus mucosae
Pathway
lmu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LBLM1_08340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmu03400
]
LBLM1_08340
Enzymes [BR:
lmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LBLM1_08340
DNA repair and recombination proteins [BR:
lmu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LBLM1_08340
RecFOR pathway proteins
LBLM1_08340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
nSTAND3
RNA_helicase
AAA_14
AAA_22
Sigma54_activat
AAA_25
AAA_3
NB-ARC
DUF815
AAA_24
IstB_IS21
TsaE
Sigma54_activ_2
NACHT
ABC_tran
Bac_DnaA
AAA_18
Parvo_NS1
NTPase_1
NPHP3_N
AAA_17
AAA_PrkA
AAA_11
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AJT50968
UniProt:
A0A0D4CLH1
LinkDB
All DBs
Position
complement(1773633..1774643)
Genome browser
AA seq
336 aa
AA seq
DB search
MDDDQHLMSAQVENEAESAGETSLRPQWLADYIGQEQIKRKLSVYIQAARSREEALDHVL
LYGPPGLGKTTLAMVIAHEMNVGIKTTSGPAIEKPGDLVAMLNELHPGDVLFIDEIHRLP
KTVEEMLYSAMEDYFIDIVVGEGPAAHPIHFPLPPFTLIGATTRAGVLSAPLRDRFGIIE
HMAYYSQAELEKIIFRSAKIFAMPIEPTGARELAMRSRGTPRIANRLLKRVRDFAQVAGC
DAIDAVTVNKALKLLQVDERGLDEIDRRILHTMIDYYHGGPVGLKTIAANVGEEMGTIEE
MYEPYLLQIGFIARTPRGRVATPAAYRHLGVALPSD
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
ttggacgacgatcagcacttgatgtcggcacaggttgaaaacgaagctgaaagtgccggt
gaaaccagtctgcggccgcaatggctggctgactatattggccaggaacagatcaaaaga
aagctttccgtttatattcaagctgcccgtagtcgtgaagaagcgctggaccacgtgctg
ttatatggaccgccgggattagggaaaaccacgctggcaatggtgattgctcatgagatg
aacgttggcatcaaaacgaccagcgggccagctattgaaaagccgggtgatctggttgca
atgctaaatgagcttcatccaggcgatgtcttgtttatcgatgagatccatcggctgccg
aaaacggttgaggaaatgctctactcagcaatggaagactattttatcgatattgtcgtt
ggtgaaggaccagctgcgcatccaattcattttccgctgccgccgtttaccttgattggc
gcaacgacgcgagcgggagtcttatcggcgcctttgcgagatcgttttggcattattgag
catatggcatattacagtcaggcagaattggaaaagattatttttcgatcggccaagatt
tttgccatgccgattgaaccaaccggcgcccgtgagctggcaatgcgttcaagaggtacg
ccgcggattgccaaccgacttttgaaacgggtgcgtgactttgcccaggttgcaggctgc
gatgccattgatgcagtcaccgttaacaaggcactcaagctgctacaggttgatgagcgt
ggcttagacgagattgaccgccgcattctgcatacgatgattgactactatcatggcggc
ccagtaggcttaaaaacgattgcggccaacgttggcgaagagatggggacgattgaggag
atgtacgagccatatctgttgcagatcggctttattgcccgcacgccaagaggacgagtt
gcaacgccagccgcctaccgtcatttaggggtcgctttgcccagtgattag
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