Lactobacillus mulieris: PUW59_01165
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Entry
PUW59_01165 CDS
T08874
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lmul
Lactobacillus mulieris
Pathway
lmul03420
Nucleotide excision repair
lmul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PUW59_01165 (helD)
03430 Mismatch repair
PUW59_01165 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmul03400
]
PUW59_01165 (helD)
Enzymes [BR:
lmul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PUW59_01165 (helD)
DNA repair and recombination proteins [BR:
lmul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PUW59_01165 (helD)
MMR (mismatch excision repair)
Other MMR factors
PUW59_01165 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
Viral_helicase1
SLFN-g3_helicase
Catalase_C
DEAD
NACHT
AAA_30
AAA_16
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WEB31012
LinkDB
All DBs
Position
236380..238674
Genome browser
AA seq
764 aa
AA seq
DB search
MNNFENEKRYEQAHLDEVLGLIKKKEAKLAGSIKSAEKEARNLNAHFFDDLKLDYDGYST
SMDTALSIHQQQQMLAERQNAWQHSSKQLSTLKRLEKKPYFARVDFEEVGEKPETIYIGL
GSFADRDDHFLIYDWRAPISSIYYDGKLGKVTYHAPSGEQEVNMTKKRQFMIENGHIENM
FDTNESIGDQMLLEVLGEKSSTQMKSIVTTIQKEQNKIIRNTSADLLFVQGAAGSGKTSA
ILQRIAYLLYRYRGNLTSSNVIMFSPNQLFNDYIENVLPEMGEQNMVQMTYWQFASRRLP
GIAVENLFEQFENSEKNNKIKDFKDSIYFFKLVTRYAQLLKEKGMVFKDLYFRDKDKPFF
SKEKIKDIYYSFPPNYKLSNRIDATRESLVNSLNHMITSESKKAWVADIIENLSQEQLNQ
LYDRPDQEFESSEKEERFLARKIVIKELQKVNKKINHNQFLNIRRQYINFLRLVGKSVDF
TKYGFSQEEWDKHISEVITGFKNKKIKMTDVSAYLYLYDLITGRRTNYEMRYAFVDEIQD
YTPFQIAYLRFNFPRAKFTMLGDLNQAIFTKDSSHDLLNQISTLFDPEKTEVVQLTKSYR
STKQITEFTKEILVQGEKIESFNRQGPKPTFYKRADFLAEIESLMSVIKENDAQKLTTAI
ITKDLASSKAVFTALKEKSVKTTLIASANQRLVPGTIVVPSYLAKGLEFDAVVMWDASDK
VYHNFDESQLVYTIASRAMYKLDIIYCEKLSPLLQVKKDLYIDK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
ttgaataattttgagaatgaaaaaagatatgaacaagcccacttagatgaagttttaggt
ctaattaagaaaaaagaagctaaattagcgggatcgattaaatctgctgaaaaagaagcg
cgtaatttgaatgctcattttttcgatgatttaaaattggattatgatggctattcaact
tcgatggatacggctttatccattcaccagcaacaacaaatgttagctgaaagacaaaat
gcttggcaacattcaagtaagcaattgtctactcttaaaagattagaaaaaaagccatat
tttgcaagagtagactttgaagaagtaggtgaaaagccagaaactatttatatcggttta
ggatcttttgctgatcgtgatgatcactttttaatttatgattggcgtgctccaatttct
tcaatttattatgatggtaagctaggtaaagttacttatcatgcacctagtggtgaacaa
gaagttaatatgaccaagaaacgtcaatttatgattgaaaatggtcatattgaaaatatg
tttgataccaatgaatcaattggtgatcaaatgttattagaagtgttgggagaaaagtct
tcaacacaaatgaaatcaatcgttactacaattcaaaaagaacaaaataaaataatccgt
aatactagtgcggacttgctttttgttcaaggagctgctggtagtggtaaaactagtgca
attttgcaaagaatagcgtatcttctatatcgttatcgaggaaatttgactagttcaaat
gtaattatgtttagtcctaatcagctttttaatgactatattgaaaatgttctaccagaa
atgggtgaacaaaatatggtacaaatgacatactggcaatttgctagtcgtcgtttgcca
ggaatagctgtagaaaacttatttgaacaatttgaaaattcagaaaaaaataataaaata
aaggactttaaagattcaatttatttctttaaacttgttacacgttatgcacagctctta
aaagagaagggaatggtgttcaaagatctttatttccgagataaagacaaaccatttttc
agcaaagaaaaaataaaggatatatattattcattcccacctaattataaattgtctaat
agaattgatgcgacccgcgaaagcttggttaatagtttgaaccatatgattactagtgaa
agtaaaaaagcttgggttgcagatataatagaaaatcttagtcaggaacaactgaatcaa
ctatatgatcgaccagatcaagaatttgaatcaagtgaaaaagaagaacgttttttagct
agaaaaatagtaataaaggaacttcaaaaagttaataagaaaattaatcataatcagttt
ttgaatatccgccggcaatatattaattttctacgattagtgggcaaaagtgtagacttc
actaaatatggattttcacaagaagaatgggataagcatatatcagaagttataactggt
tttaagaataagaaaataaaaatgacggatgtaagtgcttatttatacttatatgatttg
attacagggcgaagaaccaattatgaaatgagatatgcttttgttgatgaaattcaagat
tacacaccatttcaaattgcttatttacggtttaacttcccaagagctaaatttacaatg
ctcggtgatttaaaccaagctatttttactaaggattctagtcatgacctattaaatcaa
atatcgacattatttgatcctgaaaaaacagaggttgttcaactgaccaagtcgtatcgc
tcaactaagcagattactgaatttacaaaagaaatattagttcagggagaaaaaattgaa
tcctttaatcgacagggtccgaaaccaacattctataagagagcagactttttggcagaa
atagaaagtttgatgtctgtgattaaagaaaatgatgctcaaaagttgacaacagctatc
ataactaaagatttagcaagtagtaaggctgtttttaccgcattaaaagaaaagagcgta
aaaactactttaattgcctcagctaatcaacgattagttccagggacaattgtagttcca
tcatatcttgctaaagggcttgaatttgatgctgttgttatgtgggatgcaagtgataaa
gtctatcataactttgatgaaagtcagttagtgtatacaattgcttcacgagctatgtat
aaattggatataatttattgtgaaaagttaagtcctcttttacaagttaagaaagattta
tatattgataagtaa
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