Lactobacillus mulieris: PUW59_08065
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Entry
PUW59_08065 CDS
T08874
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lmul
Lactobacillus mulieris
Pathway
lmul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PUW59_08065 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmul03021
]
PUW59_08065 (rpoC)
03400 DNA repair and recombination proteins [BR:
lmul03400
]
PUW59_08065 (rpoC)
Enzymes [BR:
lmul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PUW59_08065 (rpoC)
Transcription machinery [BR:
lmul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PUW59_08065 (rpoC)
DNA repair and recombination proteins [BR:
lmul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PUW59_08065 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Tgi2PP
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
WEB30655
LinkDB
All DBs
Position
complement(1579863..1583531)
Genome browser
AA seq
1222 aa
AA seq
DB search
MIDVNKFESMQIGLASPNKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPSKDWAC
ACGKYKGIRYRGIVCDRCGVEVTSSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDV
SPRALEEVIYFAAYIVIDAGDTDLEPKSLLTEAEYREKKAKFGNRFVAKMGAEAIKELLQ
NVDLDKEVKSLKAELQTATGQKRTRAIRRLDILNAFKDSGNKPEWMVMDTVPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLHAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVVGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVSPKLKFYQCGVPRP
MALELFKPFVMHELVKRGVATNIRNAKRKIDREDDDIWDILEYVIKERPVLLNRAPTLHR
LGIQAFEPVLVPGKSIRLHPLACEAYNADFDGDQMAIHVPLSDEAVAESRLLMLAAHHIL
APKDGKPIVTPGQDIVLGNYWLTQAERGREGEGMIFNSPAEATMAYANGDIHFHTRIGLA
ADSMPEKTWPKGYEHGVFVTTYGKMIFNQIFPKDFFYVNDPTQDNLTHPLDVKYFLQPGE
DIHEKLDNMDLGTPFKKGFLSDAIAAVYKEYKVQRTSDFLDDMKELGYTACTTSGLTIGM
ADIPMVSDKDDIVAKAHKKVDVVSKQFRRGLITEQERHDRVISIWNACKDEVQNEVAGIF
DPRNPISVMADSGARGNISNFTQLAGMRGLMAAPNGGMMEIPVTSNFREGLTVLEMFMST
HGARKGMTDTALKTANSGYLTRRLVDVAQDVIIREEDCGTDRGITVHAIKEGDEMIEPLF
DRLVGRYTARSVFDPETHEVIAPKGVMMDEELAQEIVDRGVKEVTIRSIFTCNTQHGVCQ
KCYGMNLATGEEVEVGEAVGTVAAQSIGEPGTQLTMRNFHNGGVAGAEDITQGLPRVQEL
FEARNPKGRATISEVTGVVASIEENPAEHTREITVEGKTDTRTYSVPYTASVAVAEGDEV
VRGDKLTLGSIDPKELIRVRDALTTEKYILSEIQKAYRMQGVEIADKHVEVMARQMLQKV
RVLDPGETDILPGELMDIGEFKDRNKEVIISGGIPATAQSVILGITKAALETNSFLSAAS
FQETTRVLTDASIRSKNDPLLGLKENVIIGKIIPAGTGMPVYRSMEPQADVPKPQAVYSI
ADIERQLAEENKIDLKSLNKNK
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
ttgattgacgtaaacaaatttgaaagtatgcaaatcgggcttgcttcacctaataagatt
agatcatggtcttatggggaagttaaaaagcctgaaaccatcaattaccgtactttgaag
ccagaaaaagatgggttatttgatgaaagaattttcggtccatcaaaggactgggcttgt
gcctgtggtaaatacaagggtattcgttaccgtggtatcgtttgtgatcgttgtggtgtt
gaagtaacttcttcaaaagttagaagagaacgcatgggtcacattgaacttgctgcccct
gtaacccatatttggtatttcaagggtatcccatcaagaatgggtttggttttagatgta
tcacctcgtgcacttgaagaagttatttactttgctgcatatatcgttattgatgctgga
gatactgatttagaacctaagtcactcttaactgaagctgaatatcgtgaaaagaaggct
aagtttggtaaccgttttgttgctaaaatgggtgctgaagcgattaaggaattacttcaa
aatgttgatcttgacaaagaagttaagagcttaaaggcggaattacaaactgctactggt
caaaagagaactagagcaattcgtcgtttggatattttgaatgcttttaaagattctggt
aataagcctgaatggatggtaatggacactgttcctgttattccaccagatttacgacca
atggttcaacttgaaggtggtcgttttgcaacttctgaccttaacgatttgtaccgtcgt
gttattaatagaaataatcgtttgaagcgtttgcttgatttacatgcacctaatatcatt
gtgcaaaatgaaaagagaatgcttcaagaagctgtcgatgctttaattgataacggccgt
cgtggtcgtccagtagttggaccaggtaaccgtccacttaagtcactttcacacatgctt
aaaggtaagcaagggcgtttccgtcaaaacttgcttggtaagcgtgttgactactcaggt
cgttcagttatcgatgtttcaccaaaacttaagttctaccaatgtggtgttccacgtcca
atggcattagaattattcaagccatttgtaatgcatgaactcgttaagcgcggtgttgca
actaacattagaaatgctaagcgcaagattgaccgtgaagatgatgatatctgggacatt
cttgaatatgtaattaaggaacgtccagttcttttaaaccgtgctcctactttgcaccgt
ttaggtattcaagctttcgaaccagttttggtaccaggtaagtcaattagacttcaccca
cttgcatgtgaagcctacaatgccgactttgatggggaccagatggccatccacgtgcca
ctttcagatgaagcagttgcagaatcaagacttttgatgcttgctgctcaccacattttg
gcacctaaggatggtaagccaattgtaacccctggacaggatatcgttttggggaactac
tggttaactcaagcagaacgtggccgtgaaggtgaaggaatgatctttaattcaccagct
gaagcaactatggcttatgcaaatggtgatattcacttccatactagaattggtttagct
gctgattcaatgcctgaaaagacttggccaaagggttatgaacatggagtttttgtaact
acttacggtaagatgatttttaaccaaatcttccctaaggacttcttctatgtaaatgat
ccaactcaagataacttaactcatccgttagatgttaagtacttcttgcaaccaggtgaa
gatatccatgaaaaattagataatatggacttaggtactccatttaagaagggattcttg
tctgatgctattgcagctgtttacaaggaatacaaggttcaaagaacttctgacttctta
gatgacatgaaagaattaggttacactgcatgtaccacttctggtttaactattggtatg
gccgatattcctatggtaagcgataaagatgatatcgttgccaaggctcacaagaaggtt
gatgttgtttctaagcaatttagacgtggtttgattactgaacaagaacgtcacgaccgt
gtaatcagcatttggaatgcatgtaaggatgaagttcaaaacgaagtggctggtattttc
gacccacgtaaccctatttcagtcatggccgactctggtgcccgtggtaacatttctaac
tttactcagcttgctggtatgcgtggtttgatggccgctcctaatggtgggatgatggaa
attcctgttacttccaacttccgtgaaggtttgactgttttggaaatgttcatgtcaact
cacggtgctcgtaaaggaatgacagatactgccttgaagactgcgaactcaggatacctt
actcgtcgtttggttgatgttgcacaagacgtaattattcgtgaagaagattgtggtact
gatcgtggtattacagttcatgcaattaaagaaggcgacgaaatgatcgaaccattattc
gatcgtttagttggacgttatactgctagaagtgtctttgatccggaaactcatgaagtt
attgcacctaagggcgtaatgatggatgaagaattagctcaagaaattgttgatcgtgga
gtcaaagaagtaacaattcgttccatatttacttgcaacactcaacatggtgtttgtcaa
aagtgttacggtatgaacttagctactggtgaagaggtagaagttggtgaagcagtaggt
actgttgctgcacaatcaatcggtgaacctggtactcagcttactatgcgtaacttccac
aacggtggggttgccggtgctgaagatattactcaaggtcttcctcgtgttcaagaattg
tttgaagcacgtaaccctaaaggtcgtgcaactatctctgaagtaactggtgttgtagct
tcaattgaagaaaatccagctgaacatactcgtgaaatcactgttgagggtaagactgat
acaagaacatactctgtaccatatactgcaagtgttgcagttgctgaaggtgatgaagtt
gttcgtggtgataagttaacacttggttctattgaccctaaggaattgattagagttaga
gatgctttgactactgaaaagtatatcttgagtgaaattcaaaaggcctacagaatgcaa
ggggtagaaatcgccgataagcacgttgaagttatggcccgccaaatgcttcaaaaagta
cgtgtacttgatccaggtgaaactgatatcttgccaggtgaattaatggatattggtgaa
tttaaggacagaaacaaggaagttattatttcaggtggtattccagcaactgcacaaagt
gtaatcttgggtattactaaggcagcgcttgaaactaacagtttcttatcagctgcttca
ttccaagaaactacgcgtgttcttactgatgcttcaattagaagtaaaaacgatccactt
cttggtcttaaagaaaacgttattattggtaagattattcctgcaggtacaggtatgcca
gtttaccgttctatggaacctcaagctgatgtacctaagccacaagcagtatattcaatt
gctgatattgaacgtcaattagctgaagaaaataaaattgacttaaagagtttgaataaa
aacaaataa
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