Lactobacillus mulieris: PUW59_08200
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Entry
PUW59_08200 CDS
T08874
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lmul
Lactobacillus mulieris
Pathway
lmul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PUW59_08200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmul03019
]
PUW59_08200
03009 Ribosome biogenesis [BR:
lmul03009
]
PUW59_08200
Enzymes [BR:
lmul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PUW59_08200
Messenger RNA biogenesis [BR:
lmul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PUW59_08200
Ribosome biogenesis [BR:
lmul03009
]
Prokaryotic type
rRNA helicases
PUW59_08200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Dor1
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WEB30676
LinkDB
All DBs
Position
complement(1610153..1611607)
Genome browser
AA seq
484 aa
AA seq
DB search
MKFTELGLNDALLKAIKRSGFEEATPIQEKTIPLALAGKDVIGQAQTGTGKTAAFGLPIL
QKINNKEHFIQALVIEPTRELAIQTQEELYRLGRDEKAKVQVVYGGADISRQIRALKQTP
AILVGTPGRILDHLKRKTVKLDKIKTVVLDEADEMLDMGFIQDIESILDFAQNREHTLLF
SATMPKPILRIGEKFMKEPEIVQIKSKELTADLIDQYFVRAKEAEKFDIMCRLIDVQAPD
LAVVFGRTKRRVDELTRGLVARGYNAAGIHGDLSQAKRMSVLKRFKNGKLDILVATDVAA
RGLDISGVTHVYNYDIPQDPDSYVHRIGRTGRAGKNGISVTFVTPNEIGYMRTIENLTKK
KMSPLRPPTNDQALQGQLAIAHKQIEDLLKADLTKYTEEASELLDNYSAVDLVAAFLKNL
SKDADEIKVKITPEKPLPYKGNGRRRGHRNNFKHGGDRNERRHRKSNVRRGKHDFVIKNK
KDHK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatttacagaattaggcttaaatgatgctttgttaaaagcaattaaacgtagtggt
tttgaagaggcaactccaattcaagaaaagacaattccattagctttagctggcaaagat
gtaatcgggcaagctcaaacgggaactggtaaaactgctgcttttggtttgccaattttg
caaaaaattaacaataaagaacattttattcaagctttggttattgagccaactcgagaa
ttagcaattcaaactcaggaagaattatatcgcctaggacgtgatgaaaaggcgaaagtt
caagttgtttatggtggtgctgatattagtcgccaaattcgtgctttgaagcaaactccc
gctattttagtggggactcctgggcgaattttagatcacttaaagagaaaaacagttaaa
ttagataaaattaaaacagttgttttggatgaagctgatgaaatgctagatatgggcttt
atccaagatattgaaagcattttggattttgcccaaaatcgtgaacatacacttttattc
agtgcaacaatgcctaagccaattttgagaattggtgaaaagtttatgaaggagccagaa
attgttcaaatcaagtctaaagaattaactgctgatttgattgatcaatattttgttcgg
gcaaaagaagcagaaaaatttgatattatgtgtcgtttaatcgacgttcaagctcctgat
ttggcggttgtttttggacgaactaaaagaagagtagatgaattaactcgaggtttagtt
gctcgtggctataatgcggctggtatccacggagatttgtcacaagccaaaagaatgagt
gtattaaaacgatttaagaatggaaaattagatattctagttgcaactgacgttgcagct
cgtggtcttgatatttcaggagtaactcatgtttataactatgatattccacaagatcca
gattcttatgttcaccgaattggtagaacaggacgtgcgggtaaaaatggtatctctgta
actttcgttaccccaaatgaaattggttatatgagaactattgaaaacttgactaaaaag
aagatgtcaccgcttcgtccaccaacaaatgatcaagcacttcaaggtcaattagcaatt
gcccacaagcaaatcgaagacttactcaaggctgatttaactaaatatactgaagaagca
agtgaattattagataattattcagcagtagatttagtagcggcatttttgaagaattta
tctaaagatgcagatgaaattaaggttaagattacacctgaaaagccattgccgtataag
ggaaatggtcgtcggcgtggtcatcgcaataatttcaagcatggtggcgatcgcaatgaa
agacggcatcgcaagagtaatgttcgacgcggtaagcacgattttgtaataaaaaacaag
aaagatcataaataa
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