Ligilactobacillus murinus: CPS94_00035
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Entry
CPS94_00035 CDS
T07549
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lmur
Ligilactobacillus murinus
Pathway
lmur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CPS94_00035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmur03021
]
CPS94_00035
03400 DNA repair and recombination proteins [BR:
lmur03400
]
CPS94_00035
Enzymes [BR:
lmur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CPS94_00035
Transcription machinery [BR:
lmur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CPS94_00035
DNA repair and recombination proteins [BR:
lmur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CPS94_00035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AWZ37434
UniProt:
A0A4V1PR79
LinkDB
All DBs
Position
3356..4300
Genome browser
AA seq
314 aa
AA seq
DB search
MIEFEKPKIHKIEEGQDYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAITDVQIDGVL
HEFSTVKGVLEDVTAIILNLKKVALKLDSEDSQTLEFDVVGPKEVTAGDIQGSSDVEILN
PDQYICTVADGAVFHARMTANKGRGYVSATENKAKAEDMPIGVLPIDSIYTPIERVNYQV
EKTRVGQKNDYDKLTLDVWTNGSITPSEAISLSAKILTEHLTLFVDLTDEAKNAEIMVEK
EETHKEKMLEMTIEELDLSVRSYNCLKRAGINTVQALTNKSEADMMKVRNLGRKSLEEVK
AKLADLGLSLRHDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaatttgaaaaaccaaaaattcataaaatcgaagaaggtcaagattacggtaag
ttcgtcgttgaaccgcttgaacgtggttatggtacaactttaggtaactctttacgtcgt
atcttactttcttccttaccaggtgcagcgatcactgatgttcaaatcgatggtgtgtta
catgaattttccactgtaaaaggtgttttagaagatgtgacagcgatcatcttgaactta
aagaaagtcgcacttaaacttgattctgaagattctcaaactttagaatttgatgttgtt
gggccaaaagaagttactgccggtgacattcaaggtagcagtgatgtagaaatcctcaac
ccagatcaatatatttgtactgtggctgatggcgctgtgttccatgctcgaatgactgct
aacaagggtcgaggctatgtttccgcaacggaaaacaaggctaaggccgaagatatgcct
attggcgttttaccaatcgactcaatttataccccgatcgaacgtgtcaactaccaagta
gaaaaaacacgtgttggtcaaaaaaatgattatgataaattaacgttagacgtgtggaca
aacggctcgatcacaccaagtgaagcgatcagcttgtccgctaagatcttaacagagcat
ttgacattatttgttgatttgacagatgaagctaagaatgctgagatcatggtcgaaaaa
gaagaaacacataaagaaaaaatgcttgaaatgacaatcgaagaacttgacttgtctgta
cgttcatacaactgcttgaagcgtgctggtatcaatactgtgcaagctttgactaacaag
tctgaagcagacatgatgaaggtacgtaatcttggtcgcaagtccttagaagaagttaag
gctaaattagcagatcttggcttgtcattacgtcatgatgactaa
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