Ligilactobacillus murinus: CPS94_03380
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Entry
CPS94_03380 CDS
T07549
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lmur
Ligilactobacillus murinus
Brite
KEGG Orthology (KO) [BR:
lmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmur03032
]
CPS94_03380
03400 DNA repair and recombination proteins [BR:
lmur03400
]
CPS94_03380
Enzymes [BR:
lmur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CPS94_03380
DNA replication proteins [BR:
lmur03032
]
Prokaryotic type
DNA Topoisomerases
CPS94_03380
DNA repair and recombination proteins [BR:
lmur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CPS94_03380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
ORF_12_N
Toprim_4
C1_2
Motif
Other DBs
NCBI-ProteinID:
AWZ38035
UniProt:
A0A2Z4VZH9
LinkDB
All DBs
Position
679356..681470
Genome browser
AA seq
704 aa
AA seq
DB search
MPRSTTGTATKKKTKRKVKKNLVIVESPSKAKTIEKYLGSRYKVMASLGHIRDLPKSKMG
VDVENNYEPHYISIRGKGDVIKELRKEAKKAAHVYLAADPDREGEAIAWHLSYLLGLDPK
DKNRVVFNEITKDAVKNAFKNPRAIDMNLVDAQQARRVLDRLVGYSISPLLWAKIKKGLS
AGRVQSIALNLIIQREQEIKAFKPEEYWTLDAQFKKDKAKFDASFYGLDGKKAELKNNEE
VQNVLAKLDTKKPFTVSSVTKKERKRMPQPPFTTSTLQQTANNTLKFKTQKTMMVAQQLY
EGISLGRGGAVGLITYMRTDSTRISSVAKHEASTFIHEEYGEEYAALKPRKTKLSEGAQD
AHEAIRPSSVMRTPKSIEKYLTKDQMKLYSLIWSRFVASQMTPAIVDTMRVDLTQNGVTY
RANGSKLKFDGFTKVYAESKRKDNILPDLKEADEVLMVKNQPNQHFTLPPARYTEASLIK
TLEENGVGRPSTYAPTLNVIQKRYYVKLAARKFEPTELGEIVDKMIQECFPDILNVDFTA
NLEGQLDEIEEGKQEWVSIIDEFYQPFSDEVKEASEKLAKVTIKDEPAGFNCEICGAPMV
IKMGRYGKFYACSRFPDCRNTQAIIKQIGVKCPVCGKGQVVERKSKKNRVFYGCSRYPDC
EFVSWDKPVGRNCPKCDHYLVYKKTKKGQQVKCPNGDYEEAIQK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggtctacaactgggactgctaccaaaaagaaaacaaaacgtaaagtaaaaaag
aatttagtgatcgtggaatcaccttccaaggctaaaacgatcgaaaaatatttaggctca
cgctataaagttatggctagtttagggcatattcgtgacttgcctaagagtaagatgggg
gtcgatgttgaaaataactacgaaccacattatatttcgatccgcggtaaaggtgatgtg
ataaaagaactaagaaaagaagctaaaaaagctgctcacgtttatcttgcagccgatccg
gaccgtgaaggagaagcgatcgcatggcatctatcttaccttttaggacttgatccaaaa
gacaaaaatcgagtcgtgttcaatgagatcactaaagatgctgttaaaaatgcttttaaa
aacccccgggcgatcgatatgaatttagttgatgcccaacaagctaggcgagttcttgat
cgtttggtaggttactcgatctcaccattattatgggctaagatcaaaaaagggctatca
gccggtcgcgtgcaatcgatcgctttaaacttgatcattcaacgtgaacaagagatcaaa
gcttttaaacctgaagaatattggactttagatgcccaattcaaaaaggataaagctaaa
ttcgatgctagcttctatggtctagacggtaagaaagctgagctaaagaacaacgaagaa
gttcaaaatgttttagctaagttagacactaagaaaccatttactgtttcaagtgtcact
aaaaaggaacgtaaacggatgccacagccaccttttacaacttcgactttgcaacaaact
gccaacaacacattgaaattcaagacgcaaaagacgatgatggtagcccaacaactctat
gaagggatcagtttagggcgtggtggagccgttgggttgatcacatatatgcggactgat
tcaacgcggatctctagtgtggctaaacatgaagcatcaacatttatccatgaagaatat
ggcgaagagtatgccgccttaaagccacgtaagactaagttatctgaaggagcacaagat
gcccatgaagcgatccggccttcttcagttatgcggacccctaaatcgatcgagaaatat
ttgactaaagatcaaatgaaactctattctttgatctggtcacggtttgtggcaagtcag
atgacaccagcgatcgtagatacgatgcgggtcgatctaacacaaaatggtgtgacctat
cgtgcgaatggatcaaaactaaaatttgatggttttactaaagtctatgccgaatccaag
cgcaaagataatatcttaccagatctaaaagaagccgatgaagttttgatggtcaaaaat
caacctaatcaacacttcactttgccaccagctcgttatactgaagctagtttgatcaaa
acgctcgaagaaaacggtgttgggcgcccttcgacatatgcgccaacactaaatgttatc
caaaagcgctactacgttaaattagctgcacgtaaattcgaaccaacggaattgggtgag
atcgttgataagatgatccaggaatgcttccctgatatcttaaatgttgattttactgct
aatttagaaggtcagttagatgagatcgaagaaggtaaacaagaatgggtctctattatt
gatgaattttatcaaccattctctgatgaggtcaaagaagcttctgaaaaattagcgaag
gtcacgatcaaagatgaacctgctggtttcaattgtgagatctgtggagctccaatggtc
attaaaatggggcgttatggcaagttttacgcttgtagccggttcccagattgccgtaat
acacaagcgatcatcaaacagatcggagtaaaatgcccggtttgtggcaagggacaagtt
gttgaacgtaaatctaagaagaatcgcgttttctatggctgttcacggtatccagactgt
gaatttgtttcttgggacaagccggtcggtagaaattgccctaaatgtgaccactattta
gtctataaaaagactaaaaaaggacaacaagtcaaatgtccaaatggtgactatgaagaa
gccattcaaaaataa
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