KEGG   Ligilactobacillus murinus: CPS94_03795
Entry
CPS94_03795       CDS       T07549                                 
Name
(GenBank) hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
lmur  Ligilactobacillus murinus
Pathway
lmur03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmur00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CPS94_03795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmur03019]
    CPS94_03795
Messenger RNA biogenesis [BR:lmur03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CPS94_03795
SSDB
Motif
Pfam: PgdA_N
Other DBs
NCBI-ProteinID: AWZ38109
UniProt: A0AAD0L2W1
LinkDB
Position
complement(766496..767452)
AA seq 318 aa
MSLTIKNEGSICLESKQTIILDPKEKVAFTTGDVYLFTHLSTDLLRILADKRRKNLVYLP
QMLLKQLQKLVQAGFIRPLNFRKIKCYPYNYPVQISDLWVTAFPSDDGLNGAVSLLLEHE
GKALGYTGRFITRGAHKKRIKKWKKTFQTAKLDLLLLDSAALQTSEVFVSNTKKFKRFLT
NLSPTDLPALKLSKLAPEEILEYQEIAKQAGRTLLLAPDLAILAKLLFPFDDFTAITPTN
LKLAAEKPEKFIMQAEMTKQATVVYNKDSIKDIDVIAADQSESELKEVVHVIAPAQCLSY
GEKTLEGIEPLTKAVSFS
NT seq 957 nt   +upstreamnt  +downstreamnt
atgtccttgaccattaaaaatgaaggtagtatctgccttgagtctaagcaaacgatcata
cttgatccgaaagaaaaagtggcttttacaacgggcgatgtttacttgtttacgcattta
tcgactgatcttttgcggatcttagccgataagcgacgcaaaaatcttgtttatttacca
cagatgttacttaaacagctgcaaaaattagttcaagcaggtttcatcagacctttgaat
tttagaaaaataaagtgctatccctataattatcccgttcagatatcagatctttgggtc
acggcgtttccaagtgatgatggtttgaatggagcggtcagtttattacttgaacatgaa
ggcaaagcgcttggctatacgggtcgatttattacacgtggggcacataaaaagcggatc
aaaaaatggaaaaaaacttttcagacggctaagttagatctgttgttattagatagtgca
gctttacagaccagtgaagtttttgtatcaaacactaaaaagttcaaacgtttcttaaca
aatctgtccccgacagacttaccagctttaaaattatcaaaattagccccagaagagatc
ctagaatatcaagaaatagctaaacaagcaggcagaactttattgcttgcaccagatctt
gctattttagctaaattattattcccatttgatgattttacagctataacgccaactaat
ttaaaattagccgcggaaaagccagaaaaattcataatgcaagcggaaatgactaagcaa
gctacggtcgtttataataaggatagtattaaagatatagatgtgatcgcggcagatcaa
agtgagagcgaattaaaagaggtcgtgcatgtgatcgcaccggctcaatgtttgagctat
ggtgaaaagacattagaggggatcgaacccttgactaaggcagttagtttttcataa

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