Ligilactobacillus murinus: CPS94_03795
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Entry
CPS94_03795 CDS
T07549
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lmur
Ligilactobacillus murinus
Pathway
lmur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPS94_03795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmur03019
]
CPS94_03795
Messenger RNA biogenesis [BR:
lmur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CPS94_03795
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgdA_N
Motif
Other DBs
NCBI-ProteinID:
AWZ38109
UniProt:
A0AAD0L2W1
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All DBs
Position
complement(766496..767452)
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AA seq
318 aa
AA seq
DB search
MSLTIKNEGSICLESKQTIILDPKEKVAFTTGDVYLFTHLSTDLLRILADKRRKNLVYLP
QMLLKQLQKLVQAGFIRPLNFRKIKCYPYNYPVQISDLWVTAFPSDDGLNGAVSLLLEHE
GKALGYTGRFITRGAHKKRIKKWKKTFQTAKLDLLLLDSAALQTSEVFVSNTKKFKRFLT
NLSPTDLPALKLSKLAPEEILEYQEIAKQAGRTLLLAPDLAILAKLLFPFDDFTAITPTN
LKLAAEKPEKFIMQAEMTKQATVVYNKDSIKDIDVIAADQSESELKEVVHVIAPAQCLSY
GEKTLEGIEPLTKAVSFS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgaccattaaaaatgaaggtagtatctgccttgagtctaagcaaacgatcata
cttgatccgaaagaaaaagtggcttttacaacgggcgatgtttacttgtttacgcattta
tcgactgatcttttgcggatcttagccgataagcgacgcaaaaatcttgtttatttacca
cagatgttacttaaacagctgcaaaaattagttcaagcaggtttcatcagacctttgaat
tttagaaaaataaagtgctatccctataattatcccgttcagatatcagatctttgggtc
acggcgtttccaagtgatgatggtttgaatggagcggtcagtttattacttgaacatgaa
ggcaaagcgcttggctatacgggtcgatttattacacgtggggcacataaaaagcggatc
aaaaaatggaaaaaaacttttcagacggctaagttagatctgttgttattagatagtgca
gctttacagaccagtgaagtttttgtatcaaacactaaaaagttcaaacgtttcttaaca
aatctgtccccgacagacttaccagctttaaaattatcaaaattagccccagaagagatc
ctagaatatcaagaaatagctaaacaagcaggcagaactttattgcttgcaccagatctt
gctattttagctaaattattattcccatttgatgattttacagctataacgccaactaat
ttaaaattagccgcggaaaagccagaaaaattcataatgcaagcggaaatgactaagcaa
gctacggtcgtttataataaggatagtattaaagatatagatgtgatcgcggcagatcaa
agtgagagcgaattaaaagaggtcgtgcatgtgatcgcaccggctcaatgtttgagctat
ggtgaaaagacattagaggggatcgaacccttgactaaggcagttagtttttcataa
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