Ligilactobacillus murinus: CPS94_07005
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Entry
CPS94_07005 CDS
T07549
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lmur
Ligilactobacillus murinus
Pathway
lmur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPS94_07005 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmur03019
]
CPS94_07005 (recQ)
03400 DNA repair and recombination proteins [BR:
lmur03400
]
CPS94_07005 (recQ)
Enzymes [BR:
lmur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPS94_07005 (recQ)
Messenger RNA biogenesis [BR:
lmur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CPS94_07005 (recQ)
DNA repair and recombination proteins [BR:
lmur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CPS94_07005 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AWZ38682
UniProt:
A0AAD0KYJ6
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All DBs
Position
1396582..1398357
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AA seq
591 aa
AA seq
DB search
MTPKAALKHYFGYTEFKAGQKKVIDLLLEHKNTLALLPTGGGKSLCYQIPALLEDGLTLV
ISPLISLMKDQVDSLQQNGIPAAFINSSQEFETAKAVLTRARRHELKLLYIAPERLENQF
FLELLQTLPVSLVAVDEAHCISQWGHDFRPSYLKLPALLAQLPVSPTLVALTATATPQVA
QDIKELLMIPAENEVKTSFARDNLTFKLIKGTDFEHYLLSYLKQNPNDSGIIYASTRKKV
EQLGIMLNKMGIKAGIYHAGLSELQRRESQEDFLYDRTPIMVATNAFGMGIDKSNVRFVI
HAQVPGSLEAYYQEAGRAGRDGLPSEAILFYKDADLQVQRFFIDNSQADEQHREFDYQKL
QALTRYANTEECLQRFLVQYFGQDCPDCQKCTNCTDTREKQDITKEAQMIMSCIVRMQSR
FGKKIVAQVLAGSKAKRILELNFDQLSTYGIMHQKTKEIETLIDFLTASGYLKTSSGQFP
TLHVTQTGLAVLRNQAKVYARSEKAERNSKQRVESGLFEHLRKLRRQLAEAQHVPPFVIF
SDQALQDMCVLLPSNEMEFLEVKGVGHSKLEKYGTIFLDAIKEYKHDKQLE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
ttgacaccgaaagcagcacttaaacattactttggttataccgaatttaaagccggccaa
aaaaaagtgatcgacttactcttagaacataaaaatactcttgcactcttaccaactggg
ggcgggaaatctctgtgctatcagatcccggcactcttagaagatggtttgaccttagtc
atctcacctttgatctcactgatgaaagaccaagtcgatagtttacaacaaaatgggatc
cccgccgcctttatcaacagttcccaggaatttgaaactgctaaagcggtcttaacaaga
gcccgccggcatgaattaaaattgctctatatcgctcctgagcgcttagaaaatcaattt
ttcttagagttactacagaccttaccggtttctttagtcgcagttgatgaagcacactgt
atctctcaatggggccatgattttcgtcccagttatttaaaattaccagctttattagct
caactgccggtctctcctacgctagttgccttgaccgctaccgctaccccacaagttgcc
caagatatcaaagaattacttatgatccccgctgaaaatgaagtcaaaacgagctttgcc
cgcgataatttgaccttcaagcttatcaaaggcactgattttgaacattatcttctcagc
tatctcaaacaaaatcccaatgattctggtatcatctacgcctcgactcgcaaaaaagtc
gaacagttaggcatcatgttaaataaaatggggatcaaagcgggcatttaccatgcgggc
ttaagtgaattacaacggcgtgaaagccaagaagattttctttacgatcgtacccccatc
atggtcgctaccaatgcttttggaatggggatcgataaaagtaacgtacgctttgtgatc
catgcccaagttcccggtagtctagaggcctattatcaagaagctggtcgcgccggacgt
gacggactaccaagcgaagcgatcttattttacaaagatgctgacttgcaagtccaacgt
ttctttatcgacaattcccaagccgacgaacaacaccgtgaatttgattaccaaaaactc
caagccttgacccgctacgctaataccgaagaatgtttacaacgcttcttagtccaatac
ttcggccaagattgtcctgattgtcaaaaatgtacaaactgtactgatacccgtgaaaaa
caagacatcactaaagaagctcagatgatcatgtcgtgtatcgtgcggatgcaatcgcgc
tttggcaaaaagatcgttgcccaagttttagccggttctaaggctaaacggatccttgaa
ttaaatttcgatcagctttcaacttatggtatcatgcaccaaaaaactaaagagatcgaa
actttgatcgactttttgactgccagtggttatctcaaaacaagcagtgggcaattcccc
acgctccatgtgacccaaacagggctagccgtcttacgcaaccaagcaaaagtttacgca
cgcagcgaaaaagctgagcgcaacagcaaacaacgagtggaaagtggcttatttgaacat
ctccgtaagttgcgccgtcagctggctgaagcccaacatgtaccaccatttgtcatcttc
tccgatcaggccttacaagacatgtgtgtgctcttaccgtcaaatgagatggaattctta
gaagtcaaaggtgtcgggcatagtaaacttgaaaaatacgggacgatctttttagacgcc
atcaaagaatataagcatgacaaacagctcgagtaa
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