Ligilactobacillus murinus: CPS94_07685
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Entry
CPS94_07685 CDS
T07549
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lmur
Ligilactobacillus murinus
Pathway
lmur03420
Nucleotide excision repair
lmur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPS94_07685
03430 Mismatch repair
CPS94_07685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmur03400
]
CPS94_07685
Enzymes [BR:
lmur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPS94_07685
DNA repair and recombination proteins [BR:
lmur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPS94_07685
MMR (mismatch excision repair)
Other MMR factors
CPS94_07685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
UvrD_C
DEAD
AAA_16
NACHT
Tfb5
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AWZ38800
UniProt:
A0A2Z4VVS1
LinkDB
All DBs
Position
complement(1544434..1546734)
Genome browser
AA seq
766 aa
AA seq
DB search
MAESIKQQEQQRMDRVVAQIKKAQKKAQKNIATAKSDTQAIQDDFKNNLRIKTGTYSGMM
ETALTVRQQQQQLAERENNKTQAAKRLDVLEKMEQKPYFARVDIKEQGEQKQEKLYIGLA
SFSDEKDRFLVYDWRAPISSVYYDGGLGKVEYTTPVGKREVELELKRQFMVEDGKIVTLF
DTDETVGDQMLLEVLDEGSDTKMKSIVTTIQKEQNKIIRDTDSELLFVQGAAGSGKTSAV
LQRVAYLLYRYRGNLNSGQVVLFSPNQLFNDYIDQVLPELGEQNMVQMTYHQFTNRRLPK
VRVETLKERFEEENQGIDQKIKAVKDSLKFFKVATAYSNYLEKNGMRFKNIMHNGEIFFS
KKEIRDIYYSFNENYHLGNRLSATKEALIKRLNSKVAQAAKTDEVQKAVQDLSQQQLNEL
YGDRPRNFENGDKELNFLARQYVMQDYKKIQVAIMRNRFLNINAQYVHFLRSVPEMLELS
EFELTKTAWEAGIEKTISMLKQRRLSLTDVTPYLYLYDRITGKKGERDIKHVFIDEIQDY
TAFQLAYLKAEFPRAKFTMLGDLNQAIFTKENSHTLLSELGTMFPKEKTKVVQLTTSYRS
TQQITDFTKEVLVNGEKVTAFERNGKKPTIIVDQDKAALVNDVVDILAKNDAAKQTTAII
GKSLAECEALFTLLQAKGVQTTLIRTENQRLVPGTLIVPSYLAKGLEFDAVIMWNADQKN
YHDESERQLVYTICSRAMHQLDILALKELSPLFETVDKNLYHLIKR
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaagtattaagcaacaagaacaacaacgcatggatcgggtagtcgctcagatc
aagaaagcgcaaaaaaaggcgcaaaaaaatatcgctactgctaaaagcgatacgcaagcg
atccaagatgatttcaagaataatctccgtatcaagacgggaacttattcggggatgatg
gagaccgctttgactgtgcgccaacaacaacaacaattagccgaacgagaaaataacaaa
acgcaagccgccaaacgtttagatgtgctcgaaaagatggagcaaaagccatattttgcc
cgggtcgacatcaaagaacaaggtgaacaaaagcaagaaaagctttatatcgggttggct
tcattttctgatgaaaaagatcgctttttagtctatgactggcgggcaccgatctcaagt
gtttactatgatggcggactaggaaaagttgagtacacgacacctgtcggcaagcgtgaa
gtcgaactcgaattaaaacgccaattcatggtcgaagacggtaagatcgtaacgttattt
gatacggatgagactgtgggtgatcagatgttgttagaggttttagatgaagggtccgat
acgaagatgaaaagtatcgtgacgaccattcaaaaagaacaaaataagatcatccgcgat
actgactcagaattgttatttgttcaaggggcagctggttcaggtaagacctcagctgtt
ttacaacgagtagcgtatctattgtatcgctatcggggcaacctcaattctggtcaagtg
gtgcttttttcaccaaaccagttgttcaatgactatatcgaccaagttttacctgaatta
ggggaacaaaatatggtgcagatgacttatcatcaattcaccaatcggcgtttaccaaaa
gttcgagtcgaaacactcaaagaacgttttgaagaagaaaaccaaggtatcgaccaaaag
atcaaggcggtcaaggatagtttgaaatttttcaaagttgcgacagcttacagtaattac
cttgaaaaaaatggcatgcgtttcaaaaacatcatgcacaatggtgaaattttcttctcc
aaaaaagaaatcagagatatctactacagctttaatgaaaattatcatctgggaaatcgc
ttgagtgcgactaaggaagctttgatcaagcggctaaattctaaagttgctcaagcagca
aaaactgatgaagtccaaaaagcggtccaagatctgtcacaacagcaattaaatgagttg
tatggcgatcggccgcggaattttgaaaatggcgataaagaactgaatttcttagcgcgc
caatatgtcatgcaagactataaaaagatccaagtggcgatcatgagaaatcgcttctta
aatatcaatgcgcaatatgtgcatttcttacgtagtgtgccagaaatgctagagctaagt
gagtttgagctgactaaaacagcgtgggaagcaggtatcgaaaagacgatcagcatgctt
aaacagcgtcgtttatctttgaccgatgtaacgccatatctttacttatatgatcggatc
acgggtaaaaagggcgaacgtgatatcaagcatgtctttattgatgagatccaagactat
acggcctttcaattagcgtatctcaaagctgaatttccacgggctaaatttacaatgctt
ggtgatctgaaccaagcgatctttacgaaggaaaatagtcatacgcttttgagcgagctt
ggcacaatgtttccaaaagaaaagacaaaagtcgtgcagttgacgacttcatatcgttcg
acccaacagatcacggactttacgaaggaagttttagtcaatggtgaaaaagtgacggct
tttgaacgcaatgggaagaaaccaacgatcattgttgaccaggacaaagctgctttagtg
aacgatgttgtggatattttagctaaaaatgatgctgctaaacaaacgacagcgatcatc
gggaagagtttagcagaatgtgaagcgctctttaccttattacaagccaaaggtgtccaa
acgactttgatccggacggaaaatcaacgtttagttcctggaactttgatcgtaccttct
tatttagctaaggggcttgaatttgatgcagtcatcatgtggaatgccgatcaaaaaaat
tatcatgatgaaagcgaacggcaactggtctacacgatctgttcacgggcgatgcatcaa
ctggatatcttggcactaaaagagttatccccattatttgagactgtggataaaaattta
tatcatttgatcaaacgttga
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