Lagopus muta (rock ptarmigan): 125683938
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Entry
125683938 CDS
T09141
Symbol
RBBP4
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03082
ATP-dependent chromatin remodeling
lmut03083
Polycomb repressive complex
lmut04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125683938 (RBBP4)
03083 Polycomb repressive complex
125683938 (RBBP4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
125683938 (RBBP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125683938 (RBBP4)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
125683938 (RBBP4)
Histone modification proteins
HAT complexes
HATB complex
125683938 (RBBP4)
HDAC complexes
Sin3A-HDAC complex
125683938 (RBBP4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
125683938 (RBBP4)
PRC2.2
125683938 (RBBP4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
125683938 (RBBP4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
125683938 (RBBP4)
Chromatin remodeling factors
NuRD complex
125683938 (RBBP4)
NuRF complex
125683938 (RBBP4)
NuRF complex (fruit fly)
125683938 (RBBP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
125683938
NCBI-ProteinID:
XP_048781449
LinkDB
All DBs
Position
23:5546971..5553513
Genome browser
AA seq
425 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
EGQGS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggaagcagccttcgatgacgccgtcgaagaacgtgtgatcaacgaggag
tacaaaatatggaaaaagaacacacccttcttgtacgacttggtaatgacccacgctctg
gagtggcccagcctgactgctcagtggcttcctgatgtgacgaggcctgagggcaaagat
ttcagcattcaccggttggtcctggggactcacacttcagatgaacaaaaccatctcgtg
atagcaagtgtgcagctgcctaatgatgatgcacagtttgatgcctcacactacgacagt
gagaaaggagagtttggaggctttgggtctgttagcggaaaaattgagattgaaatcaag
ataaatcatgagggagaagtgaacagagcacgttacatgccacagaacccctgcatcatt
gccacaaagactccatccagtgacgtcctcgtcttcgattacaccaaacatccttctaag
ccagacccgtctggagagtgcaacccggatctgcgtctgcgtgggcaccagaaggaaggc
tatgggctgtcgtggaacccaaacctgagcgggcatttgctcagtgcttctgatgatcat
accatttgcttgtgggatataagtgctgttccaaaagaaggtaaagtggtggatgcaaag
accatcttcacggggcacacagctgtagtggaagatgtctcctggcacctgctccacgaa
tctctttttggatccgttgctgatgatcagaagctcatgatctgggacacgcggtcgaac
aacacctccaaacccagccattccgtggatgctcacacagctgaagtcaactgcctctct
ttcaatccctacagcgagttcatcctggctacgggatcagctgataagactgttgcgctg
tgggacttgaggaacctgaagctgaagttgcactcctttgaatcacataaagatgaaata
tttcaggttcagtggtcgccccacaatgaaaccatattggcctccagtggcaccgaccgc
cggctgaacgtctgggacttgagtaaaatcggagaagagcagtcccccgaggatgctgag
gatggtcccccagaactgctgttcattcatggtggtcacactgcaaagatctccgacttc
tcctggaatcccaacgagccctgggtgatctgttctgtatcagaagacaacatcatgcaa
gtgtggcagatggcagagaacatatataatgatgaagacccagaaggaagcgtggatcca
gaaggtcaaggatcttag
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integrated database retrieval system
