Lagopus muta (rock ptarmigan): 125683997
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Entry
125683997 CDS
T09141
Symbol
CACNA1S
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S isoform X1
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04010
MAPK signaling pathway
lmut04020
Calcium signaling pathway
lmut04260
Cardiac muscle contraction
lmut04261
Adrenergic signaling in cardiomyocytes
lmut04270
Vascular smooth muscle contraction
lmut04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125683997 (CACNA1S)
04020 Calcium signaling pathway
125683997 (CACNA1S)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
125683997 (CACNA1S)
09153 Circulatory system
04260 Cardiac muscle contraction
125683997 (CACNA1S)
04261 Adrenergic signaling in cardiomyocytes
125683997 (CACNA1S)
04270 Vascular smooth muscle contraction
125683997 (CACNA1S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmut04040
]
125683997 (CACNA1S)
Ion channels [BR:
lmut04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125683997 (CACNA1S)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
125683997
NCBI-ProteinID:
XP_048781546
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Position
24:276153..306652
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AA seq
2079 aa
AA seq
DB search
MSLVPAAVPTPSPLSGMRSTRPPRNEPGKEATAAGVLLLPQELRQHPGARDLNLNLCFVC
CACERSLQPPESGSSERGIWRSSGWLGLGAQPWGERRRNSVGRTTMEPASHQDDAKKRQQ
KEKSKKPVPPVAPRPARALFCLTLQNPLRKACISIVEWKPFEIIILLTIFANCVALAIYL
PMPEDDTNVANSSLEKFEYAFLIFFAIEAMLKIIAYGFLFHTDAYLRNGWNVLDFSIVSL
GLVTMTLEQINAKEGGSLGGKGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVP
LLHIALLVLFMIIIYAIVGQELFKGKMHKTCYYLGTDVIATVGSEKPAPCTISGHGRHCS
INGTECRGGWPGPNNGITHFDNFGFAMLTVYQCITMEGWTEVLYWVNDAIGNEWPWIYFV
SLILLGSFFVLNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLEEDLKGYMDWITHAEV
MDSHRTRGEGMMPLDEGGSETESLYEIEGMNKWILYFRQWRRWNRMFRRKCRDVVKSKFF
YWLVILLVALNTLSIASEHHFQPEWLTIVQDNANRVLLALFVAEMLLKMYALGLRQYFMS
LFNRFDCFVVCAGVLEIILVELSTLSPLGISVLRCIRLLRIFKITRYWTSLSNLVASLLN
SVRSIASLLLLLFLFIIVFALLGMQLFGGMYDFEDMEVRRSTFDNFPQALISVFQILTGE
DWNSIMYNGIMAYGGPSFPGMLVCIYFIILFVCGNYILLNVFLAIAVDNLAEAESLTSAQ
KAKAEERKRRKMSRGYPEKSEDEKQMLAKKLEQKAKGEGIPTTAKLKVDEFESNVNEIKD
PYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPMPEASSFFIFSPTNKFRMLCHR
IVNATWFTNFILLFILLSSISLAAEDPIRAESFRNQILGYFDIGFTSVFTVEIVLKMTAY
GAFLHKGSFCRNSFNILDLLVVAVSLVSMGFESSTISVVKILRVLRVLRPLRAINRAKGL
KHVVQCVFVAIKTIGNIVVVTTLLQFMFACIGVQLFKGKFYSCTDPSKLTEKECRGHFIN
YVDGDPTQIELKERVWFHNAFHFNNVFSAMMSLFTVSTFEGWPELLYRAIDTNDENKGPI
YNYRVEIAMFFIIYIILIAFFMMNIFVGFVIVTFQEQGESEYKNCELDKNQRQCVQYALK
ARPLRRYIPKNPYQYQIWYVVTSSYFEYLMFFLIMLNTICLGMQHYNQSAEMNHVSDILN
VAFTVLFTLEMMLKLMAFKAKGYFGDPWNVFDFLIVIGSIIDVILSEIDTVLASSGGLYC
LGGGCDNIVNISCMCLQWLPSPFAALTLASLPVASTCTCPACHEDTPSPAAFPWCADLPS
WKPKCQASKMGRACLSGAHVQHWRLVHPCAPSCPQGIFLGVPGCWALEEAVQRSCECPIS
GGLGTPTPPRSVPLLSAVLFCLQDPDDNSRVSITFFRLFRVMRLVKLLSRGEGVRTLLWT
FIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIAMVDGTQINRNNNFQTFPQAVLLLFRC
ATGEAWQEILLDCSYGKRCDPESDYAEGEEYTCGTGFAYFYFISFYMLCAFLIINLFVAV
IMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFC
PHRVACKRLVCMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQANEELRTIIKKIWK
RTSMKLLDQVIPPIGDDEVTVGKFYATFLIQEHFRKFMKRQEEYYGYRPKKNPVEIQAGL
RSIEEEAAPEIHRAISGDLTAEEELERAMVEAAMEEGIYRRTGGLFGQVDSFLEPSSPLQ
PHMASQRPLQFTEVGSEDLDSPVFLDDFPQEGNTNVNNANWLQGLEYEDEVLRRAVLAAP
RPPARETDLPIPLERLRRRRGAASEHHPASGQCLHPQQGSTVTAAASSSEHRWHESTDTN
MSSTPAITFLIQEALISGGLAALARDASFVAVTRDEMAASSQLEVDEVEKAAVELLKERE
ALWDTESSSVLRDTLAASEVSAPGLSVATSHQTSSAARL
NT seq
6240 nt
NT seq
+upstream
nt +downstream
nt
atgagcctggtgcccgcagccgtccccacccccagcccactcagtggcatgcgaagcact
cgcccgcctcgcaatgagccgggtaaggaagcaacagctgctggggtccttttgctgcct
caggagctgcgacagcacccgggagccagggatctaaatttaaatctgtgctttgtgtgc
tgtgcatgcgaacgcagcctccagcccccagagtccggctcctctgagagggggatctgg
aggagctctggctggctagggctgggggctcagccgtggggtgagaggaggagaaacagc
gtggggagaaccaccatggagcctgcgtcccaccaggatgatgcaaagaagaggcaacag
aaggagaagtccaagaaaccggtgccaccagtagcccctcggccagccagggctctgttc
tgcttaaccctacagaacccactgcggaaggcatgcatcagcatcgtggagtggaaacct
tttgagatcatcatcctcctgaccatcttcgccaactgcgttgccctggccatctacctg
cccatgccggaggatgacaccaacgtggccaactccagcctggagaagttcgaatatgcc
ttcctgatcttctttgccatcgaggccatgctcaagataatagcttacgggtttctgttc
catacggacgcctatctccgaaatggctggaatgtgctcgacttctccatcgtgtccctg
gggcttgtcaccatgaccctggagcagatcaatgcaaaggagggagggtctctgggaggg
aaaggtggctttgatgtgaaggccctgcgagcatttcgtgtgctgagacctctgcgcctg
gtgtctggagtgccaagtctgcaggttgtcctgaactccattatcaaagccatggtgcct
ctgctgcacatcgcgctgctcgtcctcttcatgatcatcatctatgccattgtggggcaa
gagctcttcaagggcaagatgcacaagacctgctactaccttgggacagatgtgattgcc
acagtagggtcagagaagccagccccctgcacaatctctggccatgggcgtcactgctcc
atcaatggcaccgagtgccgaggtggctggccgggacccaacaacggcatcactcacttc
gataactttggctttgccatgctgactgtctaccagtgcatcaccatggagggctggacc
gaagtgctctactgggttaacgatgccattgggaatgaatggccctggatctactttgtc
agccttattttgcttggttccttctttgttctcaacctggtgctgggggtgctcagtggg
gagttcaccaaagagcgtgagaaggccaagtcacgaggcacatttcagaagctgcgggag
aagcagcagctggaggaggatctgaagggctacatggactggatcacccatgcagaggtg
atggacagtcaccggaccagaggagaaggtatgatgccgctggatgaaggagggtcggag
acagagagcttgtatgaaatcgagggcatgaacaaatggattctctacttccggcagtgg
aggcgttggaaccgaatgtttcgtaggaagtgcagggatgtggtgaaatccaagttcttc
tactggctggtcatcctgctggtggcactgaacaccctctccattgcctctgagcaccat
ttccagcccgaatggctgacgattgtacaagacaatgccaaccgggtgctgcttgcactc
tttgtggccgaaatgctgctgaagatgtacgcgctgggcctgcgccagtacttcatgtcc
ctcttcaaccgcttcgactgctttgttgtgtgtgcgggggtcctggagatcatcctggtg
gagctcagcactttgtcacccctgggcatctctgtgctgcgctgcatccggctgctccgc
atcttcaagatcaccaggtactggacgtcactgagtaacctggtggcctctctgctcaac
tcggtgcgctccattgcctctctgctcctccttctcttccttttcatcattgtctttgcc
ctgctgggcatgcagctctttgggggcatgtatgactttgaggacatggaagtccgacgc
agcacattcgacaacttcccccaggccctcatcagtgtcttccagatcctgactggagag
gactggaattcaataatgtacaacgggataatggcttatgggggcccatccttccccggc
atgctggtctgcatctacttcatcatcctctttgtctgtgggaactatatcctcctcaat
gtcttcctggccattgcagttgataacctggctgaggctgagagcctgacctcagctcag
aaggccaaagctgaggaacgcaagcgccggaagatgtccagaggttacccagaaaagtct
gaagatgaaaaacagatgttggcaaagaagcttgagcagaaggcgaagggagaagggatt
cccacaacagccaagttgaaagtggatgaatttgaatccaatgtcaatgaaatcaaagat
ccctacccctccgcagacttcccaggtgatgatgaggaggatgagcctgaaatccccctg
agtcctcggccgcgtcctctggcagagctccagctgaaagagaaggctgtgcctatgcct
gaagccagctccttcttcatcttcagcccaacaaataagtttcggatgctgtgccacaga
atcgtcaacgccacttggttcaccaacttcatcctgctcttcatcttgctcagcagcatc
tccctggcagctgaggatcccatccgagccgagtcgttccgcaaccagattcttggatac
tttgacatcggtttcacttctgtcttcactgttgaaattgtcttgaagatgacagcatac
ggtgctttcctgcacaaaggctccttctgcaggaactcattcaacatcctcgacttgctg
gtggttgctgtgtcccttgtctccatgggattcgagtccagcaccatctcagtggtgaag
atcctccgggttctgagggtgctgagacctctgcgagccattaacagagcgaagggtctg
aagcacgtggtccagtgcgtgttcgtggccatcaaaaccattggtaacattgtggtcgtc
acgactttgctgcagttcatgtttgcctgcatcggggtgcagctcttcaagggcaagttt
tacagctgcacagatccctccaagctaacagagaaggagtgcagggggcatttcatcaac
tacgtggatggggacccaacacagatcgagctgaaggagcgggtctggttccacaatgcc
tttcacttcaacaatgtcttctcagccatgatgtcgcttttcactgtctccaccttcgag
ggctggccagagctgctgtacagggccattgacacaaatgatgagaacaaaggccctata
tacaactaccgggtggagatcgcaatgttcttcatcatctacatcatcctcattgccttc
ttcatgatgaacatctttgtgggctttgtcattgtcaccttccaggagcagggggagagc
gagtacaagaactgcgagctggacaagaaccagcgccagtgtgtgcagtacgctctgaag
gctcgcccgctgcggcggtacatccccaagaacccctaccaataccagatctggtacgtg
gtcacctcctcctactttgagtacctcatgttcttcctgatcatgctgaacaccatctgc
ctgggcatgcagcattacaaccagtctgcagaaatgaaccacgtctcagacatcctcaat
gtggcctttactgtcctcttcaccctggagatgatgctcaagctcatggcctttaaagcc
aagggctactttggggacccctggaatgtcttcgacttcctcatagtgattggcagcatc
atcgatgtcatcctcagcgagattgatactgttcttgcatccagtggtggattgtactgc
cttggcggaggctgtgataacattgtaaatatcagctgcatgtgcttgcagtggctccct
tccccctttgctgcccttacccttgccagccttcctgtggccagcacgtgcacgtgtcct
gcatgtcatgaagacacaccaagccctgctgctttcccctggtgtgcagatctcccctct
tggaagcccaagtgccaagcttcaaaaatgggtagagcttgcctgtcgggggcccacgtg
cagcactggaggctggtgcatccctgtgcccctagttgcccccagggaatcttcttgggg
gtgccagggtgctgggcactggaagaggctgtccagagaagctgcgagtgccccatctct
ggaggactggggacccctaccccccccagatctgttcctctcttgtctgctgtcctcttc
tgcctgcaggacccagatgacaactcccgtgtctccatcactttcttccggctgttccgg
gtgatgcggctggtgaagctgctgagccggggagaaggtgtcaggaccctgctgtggacc
ttcatcaaatccttccaggctctgccctatgttgccctgctgatcgtgatgctgttcttc
atctatgctgtgattgggatgcagatgtttgggaagattgccatggtggatggaacccag
atcaaccgaaacaacaacttccaaaccttcccacaagctgtgctgctgctcttcaggtgt
gccacgggggaggcctggcaggagatcctgctggactgcagctacgggaagcggtgcgac
cctgagtccgactacgcagagggcgaggagtacacctgtggcacgggctttgcctacttc
tatttcatcagcttctacatgctctgtgccttcctgatcattaatctctttgtggccgtc
atcatggacaactttgactacctcacacgtgactggtccatcctgggcccccaccacctg
gacgagttcaaacggatctgggccgagtacgaccccgaagccaagggcaggatcaagcac
ttggacgtggtgactctgctgagacgtatccaacctcccctgggctttgggaagttctgc
cctcaccgtgtagcttgtaagcgcctggtgtgcatgaacatgcccctgaacagcgatggc
actgtcaccttcaatgcaacactctttgcgctggtgaggacagccctcaagatcaagaca
gaaggtaattttgaacaggccaatgaggagctcagaaccattatcaaaaaaatctggaag
cgaaccagtatgaagcttttggaccaggtcatcccacctattggagatgatgaggtgaca
gtgggcaaattctatgctactttcctcatccaagagcatttcaggaagttcatgaagcgc
caggaggagtactatgggtaccgtcccaagaagaaccctgtagagatccaggctgggctg
aggagcattgaagaagaagccgctcctgaaattcatcgagccatctctggggacctgact
gctgaggaagagctggagagggcaatggtggaagctgccatggaggaggggatctacagg
aggacgggcggtttgtttggccaggtggacagcttcctggagccaagcagccccctgcag
ccccacatggccagccagaggcccctgcagtttacagaggtgggcagcgaagacctcgac
tcccccgtcttcctcgacgacttcccccaggaaggcaacaccaacgtcaacaacgccaac
tggctgcaggggttggagtacgaggatgaggtgctgaggagagcagtgctggcagcaccc
aggcctccagcgcgggagactgacctccccatccctttggaaaggttgcggcggagacga
ggagctgcctctgagcatcacccagcatcggggcagtgcctccatccccagcagggcagc
acagtgacagcagcagcatccagctcagaacaccggtggcatgaaagcactgacacaaac
atgtcttccacccctgccatcaccttcctcattcaagaggctctgatctctgggggcctt
gcagctctggcccgcgacgcatccttcgttgcagtgaccagggatgagatggcagccagc
agtcagctggaggtggatgaagtggagaaagcagcagtggagctgctaaaggaaagagaa
gcactgtgggacacagaaagcagctctgtcctccgggacaccttggctgcatcagaagtc
agcgccccagggctcagtgtggccacatcccatcagaccagctctgctgctcgcctgtga
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integrated database retrieval system
