Lagopus muta (rock ptarmigan): 125684142
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Entry
125684142 CDS
T09141
Symbol
TRIM33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lmut01001
]
125684142 (TRIM33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmut04121
]
125684142 (TRIM33)
Enzymes [BR:
lmut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125684142 (TRIM33)
Protein kinases [BR:
lmut01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
125684142 (TRIM33)
Ubiquitin system [BR:
lmut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125684142 (TRIM33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
PHD-1st_NSD
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
125684142
NCBI-ProteinID:
XP_048781961
LinkDB
All DBs
Position
24:complement(3846516..3869799)
Genome browser
AA seq
1092 aa
AA seq
DB search
MAENKGGGGGGEGAAEAGPGGGGALEPAAASPSGAAPPAPSAAPPEERESPGAAAAAAAE
RGVGEAEAEAGPGVVPGPGPSPVPPLTPAVPGPFSLLDTCAVCAQSLQSRREAEPKLLPC
LHSFCRRCLPEPERQLSVPVPGGANGDVQQVGVIRCPICRQECRQIDLVDNYFVKDTSET
PSSSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHMIRKKEDVSSE
AVGASGQRPVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIE
NLLAKLLEKKNYVNFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINEINKKGKSLLQHL
ENVTKERQMKLIQQQNDITGLSRQVKHVMNFTNWAIASGSSTALLYSKRLITFQLRHILK
ARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIENKPAPSYTPNVVVGQAPPGTNHINK
APGQINLAQLRLQHMQQQVYAQKHQQLQQMRMGQPSGSVPRQTNPQVLQQQPPRLISMQT
MQRGNMNCGAFQAHQMRMAQNAARIPGIPRHNGPQYSMMQPHLQRQHSNPGHAGPFPVVS
VHNNTINPTSPTTATMASANRGPTSPSVTAIELIPSVTNPENLPSLPDIPPIQLEDAGSS
NLDNLLSRYITGSHLPPQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSC
GSSGRTAEKTSVNFKSDQVKVKQEPGTEEEICSFSGTVKQEKTEDGRRSACMLSSPESSL
TPPLSTNLHLESELEALGSLENHVKTEPGDLSESCKQSGHGLLNGKSPMRSLMHRSARTG
GEGSNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDLS
KPEVEYDCDNLQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPVPASIPNYYK
IIKKPMDLSTVKKKLQKKHSQHYQTPEDFVADVRLIFKNCERFNEMMKVVQVYAETQEIN
LKADSEVAQAGKAVALYFEDKLTEIYPDRTFQPLPEFEQEEDDGEITEDSDEDFIQPRRK
RLKSDERPVHIK
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaacaaaggaggcggcggcggcggggagggggctgccgaggccgggccgggc
ggcggcggcgctttggagcccgcggccgcgtccccctcgggcgcggcgccgcccgcaccc
tccgcggcgcctcccgaggaacgggagagcccgggcgcggcggcggcggcggcggcggag
cgcggtgtcggggaggccgaggccgaggcggggcccggggtggttccggggccgggcccc
agcccggttcccccgctgacgccggcggtgccggggcctttctcgctgctggacacctgc
gccgtgtgcgcgcagagcctgcagagccggcgcgaggctgagcctaaactgctgccctgc
ctgcactccttctgccgccgctgtttgcccgagcccgagcggcagctcagcgtgcccgtg
cccggcggcgccaacggcgacgtgcagcaagttggggtgatcagatgtccgatatgccgc
caagaatgcaggcagatagatctggtggataactactttgtgaaggacacatcggaaaca
ccgagcagctctgatgagaaatcagaacaggtgtgcacaagctgtgaagacaacgctagt
gctgtgggattttgtgtagaatgtggggaatggttgtgcaagacttgcatagaagctcat
cagcgagtaaaatttactaaagatcatatgatcagaaaaaaagaggatgtatcttcagag
gccgtgggagcatctggtcaacgtcctgttttctgtcctgtccacaaacaagagcagtta
aaacttttctgtgaaacatgtgacaggctgacatgcagagactgtcagttactggaacac
aaagaacacaggtatcagtttctagaagaagctttccagaaccagaagggtgcgattgag
aacctgttggccaaacttcttgagaagaagaattatgtcaattttgcagctacacaagtt
caaaacaggataaaagaagtaaatgaaactaacaaacgagtagaacaggaaatcaaagtg
gctatattcaccctcataaatgaaatcaataaaaagggcaaatctctcctacagcacctt
gagaatgtaacgaaggaaagacagatgaagttaatacaacagcaaaatgacatcactggt
ctttctcgacaagtgaagcatgtgatgaactttactaattgggccattgcaagtggcagc
agtactgctttgctgtacagtaaacggctgataacattccagttacgacatattttgaag
gcacgttgtgatcctgtcccagctgccaacggagcaattcgctttcattgtgaccccacg
ttttgggcaaagaacgttgtcaatttaggtaaccttgttattgaaaataagccagctcct
agttacactcctaatgtagtggttggacaagctcctccagggacaaaccacatcaacaaa
gctccaggacaaatcaatctagcacagcttcgacttcagcacatgcagcaacaggtgtat
gcacaaaagcatcagcaattgcagcagatgaggatgggacagccatctgggtcagttccc
agacaaaccaaccctcaagtcttacagcagcagcctcccaggttgatcagcatgcagacc
atgcagagaggtaacatgaactgtggggctttccaagcacatcagatgagaatggctcag
aatgctgctcgtataccaggaataccacgccacaatggaccacaatactccatgatgcaa
cctcaccttcaaagacaacattctaaccctgggcatgcggggccttttccagttgtttct
gtgcacaacaacactattaatccaactagtcctactacagcaacaatggcaagtgcaaac
cgtggcccaaccagtccgtctgttacagcaatcgaactcattccttccgtcacaaaccca
gagaatttaccttccctgccagatatcccacccatccagcttgaggatgctggttcaagt
aatttggataaccttttaagcagatatatcacaggcagccatctacccccacaacccaca
agtaccatgaatccttccccaggaccttcagctctatctccagggtcatcaggtttatcc
aactcccacactcctgtgaggccacctagtacctccagcacaggaagtagaggaagctgt
ggctcctcaggcagaactgctgagaaaactagtgttaacttcaagtctgaccaggtaaaa
gtcaagcaagagccggggacagaggaagagatatgcagtttctcaggaacagtaaagcag
gagaaaacagaggatggcagaaggagtgcttgcatgcttagcagtcctgagagcagcttg
acaccaccactgtccactaacttgcatctggaaagtgaattggaagccttaggaagtctg
gaaaatcacgtaaaaactgagccaggagacttgagtgaaagctgcaaacagtctgggcat
ggccttctcaatggaaaatcccccatgcggagcctaatgcaccgatcagctagaactgga
ggagaaggcagtaataaggatgatgatccgaatgaagactggtgtgctgtatgccaaaac
ggaggagatctgttatgttgtgaaaagtgccccaaagtgtttcacctgacttgtcatgtt
ccaacactcctcagctttccgagtggagactggatatgtacattctgcagagatctaagc
aaaccagaagtagaatatgattgtgacaacttgcaacacagcaagaaagggaaaacagca
caaggcctgagtccagtggaccaaaggaaatgtgaacgtctcctgctttacctgtattgt
catgagctgagcattgaatttcaggagccagtcccagcctcgataccaaactactacaaa
ataataaagaagccaatggatttatctacagtgaaaaagaaactgcaaaagaagcattct
cagcattaccaaactcccgaggactttgtggctgatgtcaggttgatcttcaagaactgt
gaaaggtttaatgaaatgatgaaagttgttcaagtttatgcagaaacacaagagattaat
ttgaaggctgattcagaagtagcacaggcagggaaggcagttgcattatactttgaagat
aaacttacagagatctacccagacaggaccttccagcctttgcctgaatttgagcaggaa
gaggatgatggtgaaataactgaggactccgatgaagattttatacagccacgtaggaaa
cgcctaaaatcagatgagagaccagtgcatataaagtaa
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