KEGG   Lagopus muta (rock ptarmigan): 125684153
Entry
125684153         CDS       T09141                                 
Symbol
YOD1
Name
(RefSeq) ubiquitin thioesterase OTU1
  KO
K13719  ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    125684153 (YOD1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lmut01002]
    125684153 (YOD1)
Peptidases and inhibitors [BR:lmut01002]
 Cysteine peptidases
  Family C88
   125684153 (YOD1)
SSDB
Motif
Pfam: zf-C2H2_OTU1_C OTU OTU1_UBXL Zf-C2H2_ZNF451_5th zf-C2H2_2
Other DBs
NCBI-GeneID: 125684153
NCBI-ProteinID: XP_048781998
LinkDB
Position
24:complement(2609314..2613875)
AA seq 302 aa
MLRLRCKARSGTQPLPGLTAHSRLRDMQAALAALTGVPAPAQRLLLGFPPRSLDLSDGER
RLGELGIHSGDTLIVEEDTSKPSAGSPVVAKRMMAVREAVPVLARRVVPADNSCLFTSVY
YVVEGGVYDPGCAPEMRSLIAQIVASDPEAYCEAVLGKTNREYCDWIRREETWGGAIEVS
ILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIHYDPLERKIPDSDVPPQTIF
STSDDVVLAQALELADEARRKRQFTDVNRFMLRCMVCQKGLTGQVEAREHAKETGHTNFG
EV
NT seq 909 nt   +upstreamnt  +downstreamnt
atgctgcggctgcgctgcaaggcccggagcggcacccagccgctgcccggcctcacggca
cactcccgtctccgcgacatgcaggccgccctggccgccctcaccggcgtccccgcccct
gcccagcggctgctgctcggcttccctccgcggagcctcgacctcagcgacggcgagcgg
cggctgggcgagctgggcatccactcgggagacacgctcatcgtggaggaggacacgtcc
aagcccagtgccggctctccagtcgtggccaagaggatgatggcggtgagggaagcggtc
cccgtgctggccaggagggtggtaccagctgataactcgtgtctgttcaccagtgtgtac
tacgtggtggagggaggtgtgtacgaccctggctgtgccccggagatgcgcagcctcatc
gcacagattgtagccagcgaccccgaggcgtattgtgaagcagtgctggggaaaaccaac
agggaatactgcgactggatccggagggaggaaacctgggggggagccatcgaggtttcc
attttatccaagttttatcagtgtgaaatctgtgtggtggacacgcagacagtcagaatc
gatcgtttcggggaggatgccgggtacaccaagcgggtcctgttgatctacgatgggatt
cattacgatccgctcgagcgtaaaatccccgactcggacgttcctccccagaccattttc
tctacttctgatgatgttgttctcgcacaagccttggagctagcagacgaagccagacgg
aagagacagttcactgacgtgaatcgcttcatgctgaggtgcatggtgtgccagaaggga
ctgacgggacaagtggaagccagagaacacgccaaggagacgggacacaccaactttggg
gaggtgtga

DBGET integrated database retrieval system