Lagopus muta (rock ptarmigan): 125684228
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Entry
125684228 CDS
T09141
Symbol
SORT1
Name
(RefSeq) sortilin isoform X1
KO
K12388
sortilin
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
125684228 (SORT1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Mo-co_dimer
Motif
Other DBs
NCBI-GeneID:
125684228
NCBI-ProteinID:
XP_048782180
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Position
24:complement(1217716..1226377)
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AA seq
782 aa
AA seq
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MGPRGAARLTVAVAAVALAAALRASTGGGQEEGGEGCGGLRGVTAVLGNNTHQCVFDDLS
GSVSLSWVGDSTGVILVLTTFQVPWVIVISGQSKLYRSEDYGKTFKDITNLINNTFIRTE
FGMAISPDNSGKVILTGDVSGGSRGGRIFRSSDFAKNFVQTELPFHPLAQISYHPQDSNR
LLALSTDNGLWVSKDFGERWEQIHRAVCLAKWGANDAIFFTTYLNGSCKADLGFLELKKT
TDFGKTFKVIGTKIYSFGLGGRFLFASVMTEKGFTRRIHVSLDQGESWSMAQLPSVGHEQ
FYSILAANDDLVFMHVDEPGDTGYGTIYTSDDRGVVFSKSLERHLYTTTGGETDFTNVTS
LRGIYITSVLSEDNSIQSVITFDRGGEWVPLRKPKNTTCDSTARSKEECSLHIHASYSIS
QKLNVPMVPLSEPNAVGIVIAHGSVGGAISVMSPDVYISDDGGYTWARMLEGPHHYAILD
SGGLIVAIAHSSQPVNVLEFSTDEGQCWYRYTFTKEPIFFTGLASEPGARSMNVSIWGFR
SSFLSRKWVSYTIDFSQLLSRSCEDDDYTIWLAHSSDPRDPTDGCILGYKEEFRRLRKSS
VCQNGRDYAVSAQPSVCPCTLHDFLCDFGYYRPENQSVCVEQPELKGHDLEFCLYGRREL
LRTSGYRKIPGDKCRGGENPSREETDMKKKCTSTLLSPGQLAASPSPTPIVLAVVAVLLV
SAVAAVLLVKKYVCGGRFLVHRYSVLRQHAEASGAEGPETAEPPSPPYKGGYHDDSDEDL
LE
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgcgcggggcggcgcggctgacggtggcggtggcggcggtggcgttggcggcg
gctctgcgggcgtccacgggcggagggcaggaggagggcggggagggctgcggggggctg
cgcggcgtcacggccgtgctgggcaacaacacgcaccagtgcgtcttcgacgacctcagc
ggctccgtgtccctgtcgtgggtgggcgatagcacgggggtcatccttgtgctgaccacg
ttccaggtgccctgggtgattgtgatctctgggcagtccaagctgtaccgcagtgaggac
tatgggaagaccttcaaggacatcaccaacctcatcaacaacaccttcatccgcaccgag
tttggcatggccatcagccccgacaactcggggaaggtcatcctgacaggtgatgtctcc
ggtggcagccgcggcggccgcatcttccgctcatctgactttgccaagaactttgtgcag
actgagctgcccttccaccctctggcacagatctcctaccacccgcaggactccaaccgc
ctgctggcactcagcaccgacaatggcctctgggtctccaaggactttggggagcgctgg
gagcagatccacagagctgtctgcttggccaagtggggtgcaaacgacgccatcttcttc
accacctacctgaacggctcctgcaaagctgacctcggcttcctggagctgaagaaaacc
accgacttcggcaaaaccttcaaagtcatcggcaccaagatttactccttcgggctgggc
ggccgcttcctcttcgcctccgtcatgacggagaagggcttcacgcggcgcatccacgtc
tcgctggaccaaggtgagagctggagcatggcacagctgccctccgtcggccacgagcag
ttctactccatcctggctgccaacgacgacctggtgtttatgcatgtggatgagccgggc
gacaccggctatggcaccatctacacatcagacgaccgcggcgtggtgttctccaagtcc
ttggaacgtcacctctacaccacaaccggcggggagaccgacttcaccaacgtcacgtcg
ctgcgtggcatctacatcaccagcgtgctgtctgaagacaactccatccaatccgtcatc
acgtttgatcgaggtggggagtgggtgccgctgcggaagcccaagaacacgacgtgcgac
tcgacggcccgcagcaaggaggagtgcagcctccacatccacgcgtcctacagcatctca
cagaagctcaatgtgcccatggtgccgctctctgaacccaacgccgtcggcatcgtcatc
gcccacgggagcgttgggggggccatctcagtgatgagccctgatgtgtacatctcggat
gatgggggctacacgtgggcacggatgctggagggcccccaccactacgccatcctggat
tcaggcggcctcatcgtggccattgcgcacagcagccagcctgtcaacgtcctggagttc
tccacagatgaggggcagtgctggtaccgctacaccttcaccaaggagcccatcttcttc
actgggttggcatccgagcccggcgcccgctccatgaatgtcagcatctggggcttccgc
agcagcttcctgtcccgaaagtgggtgtcctacaccattgacttcagccaactgctcagc
cgcagctgtgaggacgacgactacaccatctggctggcgcactccagcgacccccgcgac
cccacggacggctgcatcctgggctacaaggaggaattccggcgcctgcgcaaatcctcc
gtctgtcagaacggccgcgattacgccgtcagcgcgcagccctccgtctgcccctgcacc
ctgcacgacttcctctgcgatttcggctattaccgccctgagaaccagtctgtgtgcgtg
gagcagcccgagctgaagggccacgacttggagttctgcctctacggccgccgcgagctg
ctgcgcaccagcgggtaccgcaagattcccggggacaaatgcaggggaggggagaacccc
agcagggaggagacggacatgaagaagaaatgcaccagcactctgctgagccccgggcag
ctggcggcgtcccccagccccacacccatcgtgctggccgtggtggccgtgctgctcgtt
agtgccgtggccgcagtgctgctcgtcaagaaatacgtctgcggtgggaggttcctggtc
catcgttactccgtgctgcggcagcacgccgaggccagcggcgctgaggggccggagaca
gcagagcccccctcaccgccctacaagggggggtaccacgacgactcggatgaggatctg
ctggagtag
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