Lagopus muta (rock ptarmigan): 125684456
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Entry
125684456 CDS
T09141
Symbol
SMARCE1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125684456 (SMARCE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125684456 (SMARCE1)
03036 Chromosome and associated proteins [BR:
lmut03036
]
125684456 (SMARCE1)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125684456 (SMARCE1)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125684456 (SMARCE1)
PBAF complex
125684456 (SMARCE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Sarcoglycan_2
Pepsin-I3
Motif
Other DBs
NCBI-GeneID:
125684456
NCBI-ProteinID:
XP_048782565
LinkDB
All DBs
Position
25:700372..714134
Genome browser
AA seq
412 aa
AA seq
DB search
MSKRPSYAPPPTPAPATQMPSTPGFVGYNPYSHLAYNNYRLGGNPGTNSRVTASSGITIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYE
AEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPD
DYDDGFSMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEERHQEKKRKFLESTESFNNELKRLCSLKVEVDMEKIAAEIAQAEEQARKRQ
EEREKEAAEQAERSQNNTAAEEEQAANKMEEKKEEESTPMETEEPHPEESTESQQNGEEG
TSTPDDKESGQEGADSTAEEGTSDSNTGSESNSATVEEPPADPNTEESEKKE
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaggccatcttatgctccacctcctaccccagctcccgcaacccaaatgccc
agcacaccagggtttgtgggatacaatccatacagccatctggcctacaacaactacagg
ctgggagggaacccgggcaccaacagccgggtcacggcttcctctggtattaccattcca
aagcccccaaagcccccagacaagcccctgatgccctacatgaggtacagccggaaggtc
tgggaccaagtgaaggcgtccaatcctgatttgaagttatgggaaattggcaagattatt
ggaggaatgtggcgagatctcactgatgaagagaagcaagagtatttgaatgaatatgaa
gctgaaaagattgagtacaatgagtccatgaaggcctaccataactctcctgcatacctt
gcctacatcaatgcaaaaagtcgtgcagaggctgcgttagaagaagaaagccgccaaagg
cagtcgcgcatggagaagggcgaaccttacatgagcattcagccagcagaagatccagat
gattacgacgatgggttttcgatgaagcacacggccacggctcgcttccagaggaaccat
cggctcatcagtgagatcctgagcgaaagtgtggttcctgacgtccgctccgttgtcact
acagctagaatgcaagttcttaaacgccaggttcagtctctaatggttcaccagcgtaaa
ctggaagctgaactgctgcaaattgaagagcgtcaccaggagaagaagaggaagttcttg
gaaagcacagaatccttcaacaatgagctcaaaaggctatgcagtttgaaggtggaagtg
gatatggaaaaaattgcagctgaaattgctcaagctgaggaacaggctcgcaagaggcag
gaggaaagggaaaaggaagcagctgagcaagctgagcgcagtcagaataacacagcagct
gaggaagaacaggcagctaacaaaatggaggagaagaaagaagaggagagcactccaatg
gagacagaagagcctcacccagaagagagcacagaaagccagcagaacggtgaagaggga
acatctacccctgatgataaggagagtggccaagagggggctgacagcactgcagaggaa
ggaaccagtgacagcaacactggttcagagagcaacagtgcgacagtggaagagcctcct
gcagaccccaacactgaggagagtgagaagaaagaataa
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