Lagopus muta (rock ptarmigan): 125684579
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Entry
125684579 CDS
T09141
Symbol
DHX58
Name
(RefSeq) ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
125684579 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lmut04054
]
125684579 (DHX58)
Enzymes [BR:
lmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125684579 (DHX58)
Pattern recognition receptors [BR:
lmut04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
125684579 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
Helicase_C
ResIII
DEAD
SWI2_SNF2
AAA_11
AAA_19
AAA_22
Motif
Other DBs
NCBI-GeneID:
125684579
NCBI-ProteinID:
XP_048782760
LinkDB
All DBs
Position
25:381291..385669
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AA seq
674 aa
AA seq
DB search
MELRGYQLEAVAPALGGRNSIVWLPTGAGKTRAAVHVCRRHLEGRRGGRVAVLVNKVHLV
QQHLEKEFHVLRDAFKVAAVSGDSSHKCFFGQLVKGSDVVICTAQILQNALLSREEEAHV
ELTDFSLLVIDECHHTHKEAVYNKIMLSYLQKKLSGQRDLPQILGLTASPGTGGETSFEG
AVEHILQICANLDTEVITSVQKHTQHLQSHVPQPRKQYDLCQERALDPFGQRLKKIMAQI
QEHMEMPGLPQDFGTQLYEQRIVELENRAAERFCRKSRVCALHLRRYNDALLINDAVRMM
DAFQCLQQFYADERDTKDPTERFLANTFEENRATLLALAGDQRYENPRLSKLEEILQEHF
QPPGSSRGIVFTKTRQSAHSLLRWFQDTARLCRRHIRAAVLTGTGYSNQAKGMTQNEQQD
VIALFRSGELNLLFSTSVAEEGLDIPECNIVVRYGLMTNEIAMVQARGRARAQNSVYSVL
AKASSREVFREQLNEKLVELMERAISAVQAMPEREYRLKILELQRNAVLSWKVKEDRSSE
RQQLHDPDDVYFHCVNCNKAVCRGSDIRTVEAMHHVNINPNFRFYYTVLPGKMHFERTFR
DWEPGCRIVCSECRQEWGMEMIYRNVTLPILSIKNFVVVTPDEKKKYKKWSRVTFPIEEF
SYLEYCSSTQDESL
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggagctccgcgggtaccaactggaggcggtggccccggccctgggcggccgtaacagc
atcgtgtggctgcccacgggcgccggcaagacacgcgcggccgtgcacgtctgcaggcgg
cacctggaggggcggcggggcggccgggtggccgtgctggtcaacaaggtgcacctggtg
cagcagcacttggagaaggagttccacgtcctgcgcgatgccttcaaagtggcagcggtc
agcggggacagcagccataaatgcttctttgggcagctggtgaagggcagcgatgtggtc
atctgcacggcgcagatcctgcagaacgcgctgctcagcagggaggaggaggcgcacgtg
gagctgacagatttctccctgctggtgatagatgagtgccaccacactcacaaggaagcc
gtctacaacaaaatcatgctgagttacctgcagaagaagctcagcgggcagcgggacctg
ccgcagatcctgggcctgacagcatcccctggcaccgggggggaaacttccttcgaaggg
gctgtggagcacatcctgcagatctgcgccaacttggacaccgaggtgatcacatcagtg
cagaagcacacacagcacctgcagagccatgtgccccagcccaggaagcagtacgacctg
tgccaggagagagcgctggacccctttggccaacggctgaagaagatcatggcacagatc
caggagcacatggagatgcccggactgccacaggactttggcacccagctgtatgagcag
cgcatcgtggagctggagaacagagcggcagagaggttttgtcgcaagtcacgggtgtgc
gcgctgcacctgcgcaggtacaacgatgcactgctgatcaacgacgctgtgcgcatgatg
gacgccttccagtgcctgcagcagttctatgctgatgagagggacacaaaggaccccacc
gagcgcttcctggccaacacctttgaggagaacagggccacgctgctggcgctggccgga
gaccagcgctacgagaacccccggctgagcaaactggaggagatcctgcaggagcacttc
cagcccccggggtcatctcgtggcattgtcttcaccaagacgcggcagagcgcacacagc
ctgctccgctggtttcaggacacggcccggctgtgcaggcggcacatcagggcggccgtg
ctcaccgggaccggctacagcaaccaggccaagggcatgacccagaatgagcagcaggat
gtgatcgcactgttccgcagcggagagctcaacctgctcttttccaccagcgtggccgag
gagggcctggacatccctgagtgcaacattgtggtgcgctacgggctgatgaccaacgag
attgccatggtgcaggcccggggtcgtgcccgtgcccagaacagtgtgtactctgtcctc
gccaaagccagcagccgggaggtgttccgggagcagctcaatgagaaactggtggagctc
atggagagggccatcagcgcagtgcaagccatgcctgagcgggagtaccgcctgaagatc
ctggagttgcagagaaatgctgttctcagctggaaagtgaaggaagacaggagcagcgag
aggcagcagctgcacgacccggatgacgtttatttccactgtgtcaactgcaacaaggct
gtgtgccgcggcagcgacatccgcacagtggaggccatgcaccacgtgaacatcaacccc
aacttcaggttttattacacagtcttacctgggaaaatgcactttgagcggacgttcagg
gactgggagcccgggtgccgcattgtgtgcagtgagtgcaggcaggagtggggaatggag
atgatctaccggaacgtgacgttacccatcctcagcatcaaaaactttgtggtggtgacc
ccggatgagaagaagaagtacaagaagtggagcagagtgacgttccccatcgaggagttc
agctacctggaatactgctccagcacccaggacgagtccctgtag
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