Lagopus muta (rock ptarmigan): 125684736
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Entry
125684736 CDS
T09141
Symbol
MED1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125684736 (MED1)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
125684736 (MED1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
125684736
NCBI-ProteinID:
XP_048783113
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All DBs
Position
25:1038485..1051944
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AA seq
1583 aa
AA seq
DB search
MKAVPGGAEEAEKLNKMSTLLERLHAKYNQNRPWTETMKLVRQVMEKRVVMNSGGHQHLV
SCLETLQKALKVSSLPAMTDRLESIARQNGLGSHLSANGTECYITSDMFYVEVQLDPTGL
LCDVKVAHHGENPVSCPELVQHLREKNFDEFSKHLRGLVNLYKLPGDNKLKTKMYLALQS
LELDLSKMAGMYWQATNANPLDKILHGSVGYLTPRSGGLLMNLKYYVSPYDLFEDGTGAP
VILHESNVPRSLGMNVSVTVEGTMAMYKLPIAPLIMGSHPVDSKGTPSFSSITSANSVDL
PACFFLKFPRPIPVSRAFIQKLQSCTGIPLFDTAPAFVPLYELITQFELSKEADPIPLNH
NMRFYAALPGQQHCYFLNKDAPLPDGRSLQGTLISKIAFQHPGRVPLILNLIRHQVAYNT
LIGSCVKRTVLKEDSPGILQFEVCPLSDSCFSVSFQHPVNDSLVCVVMDVQDSTHVNCKL
YKGLSDALICTDDFIAKVVQRCMSIPVTMRAIRRKAETIQADTPALSLIAETVEDMVKKN
LPPASSPGYGMTTGSNPMSGTTTPTNTFPGGPITTLFNMSISMKERHDSVGHGEDFSKVS
QNPILTSLLQITGNVGSAIGSSPTPPHHTPPPLSSPAGNTKNHPMLMNLLKENPPQDFST
LYGSSPLERQNSSSGSPRMEVGPGGSKQKKKKSRMPADKPKHQTEDDFQRELFSMDVDSQ
NPIFDVNMTADTLDTPHITPAPSQCSTPPTTYPQPIPHSQPSIQRMVRLSSSDSIGADVT
DILSDIAEEASKLPATNEDCPPIGTPVRDSSSSGHSQSALFDPDVFQTNNSENPYTDPAD
LIADAAVSPNSDSSNHFFPDGVDFNPDLLNSQSQSGFAEEYFDESSQSGDTDDFKGYASQ
ALSTLGVQVLGGDGGENKFKGSNPSDTVDFSIIAAASKALGSSDIMEHHSGGQSPLLNAG
DLGKEKSQKRVKEGNGSGGNMAGSGIDGKPGKRSRTPSSDGKSKEKLPKRKKQETDGKSP
SHSSSNRPFTPPASTGGSKSPGSSGRSQTPPGVATPPIPKITIQIPKGTVTVGKPSSHGQ
YTSSGSVTSSSSKSHHSHSSSSSSSSSSSTSGKIKSSKSEGSSGSKMSSSLYSSQGGSSS
GPSKSSVQSVGKPGSSPITKHGLSSGSGSTKMKPQGKPSSLMNPSMSKPNISPSHSRPSG
GSDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTGSSSSMKSSSGMGSSGSMSQKPP
PSSNSSTASSSSFSSSGSSMSSSQNQHGSSKGKSPSRNKKPSLTAVIDKLKHGVVTSGPG
GDDPMDGQMGPSSNSSSHAMSSKHNMAGGEFQGKREKSDKEKSKVSVSGGSVDSSKKASD
SKNVGSTGVAKIIISKHDGGSPSIKAKVTLQKPGEGGGDGLRPQMASSKSYGSPLISGST
PKHERCSPSHSKSPAYTPQNIDSESESGSSIAEKSYQNSPSSDDGIRPLPEYSSEKHKKH
KKEKKKVKDKDRDRDRDRDKDRDKKKSHGMKPESWSKSPISADQPLSMASSAILSAERPS
RPSPEFLIGEEDDDLMDVALIGN
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcggtgccgggaggcgctgaggaggcagagaagctgaataagatgagcactctc
ttagaaagacttcacgcaaagtacaaccagaacaggccttggacagaaaccatgaagctg
gtccgtcaagtcatggaaaagcgagttgtgatgaactctggggggcaccagcatctggtg
agctgtttggagaccttgcaaaaagcattaaaagtgtcttctctgcctgccatgacggat
cgcttggagtccatagccagacaaaacggcctcggatctcacctcagtgcaaatggcact
gaatgttacatcacttcagacatgttctatgtggaagtccagttagatcctacagggctg
ctgtgtgatgtcaaggtggctcaccatggagaaaaccctgtgagctgtccagaattggtg
caacatctgagggagaaaaattttgatgaattttctaagcatctgagggggcttgtgaac
ctgtataagttgccaggagacaacaaactcaaaactaaaatgtacttggctcttcagtcc
ttggagctggatctctccaaaatggcagggatgtattggcaagccaccaacgcaaaccca
ctggacaagattctccatggcagtgttggctatctcaccccgaggagcggaggtctcctt
atgaatctcaagtattacgtctcgccctatgatttatttgaagatggcactggagcccct
gttattttgcatgagagcaatgttcctcgatctttggggatgaacgtgtcggtgacagtt
gagggaaccatggcgatgtacaaacttcccattgcgccgctgatcatgggttctcatcca
gtggacagcaaaggaactccatctttctcatcaatcaccagtgccaacagcgtggattta
ccagcttgcttcttcttgaaattcccacgtcccattccggtgtcccgagctttcattcag
aaacttcagagctgcacaggcattccgttgtttgacacagcaccagcgtttgtacccctg
tatgagctgatcacacagtttgaattatccaaggaggccgatcccatccctttgaaccac
aatatgcgcttctacgcagctcttccaggacagcagcactgttactttctgaacaaggat
gctcctctcccagatggaagaagccttcaaggaacattgatcagcaaaatcgccttccag
cacccgggccgggttcctcttatcctcaatttgatcagacaccaagtggcatacaacaca
ctgattggcagctgtgtcaagcgaacagttttaaaggaagattctcctgggatcctgcag
tttgaagtttgtcctctctcagactcctgttttagtgtatcttttcagcatcctgtgaat
gactctctggtgtgtgtggtaatggatgtgcaagactctactcatgtgaactgtaagcta
tacaaagggctgtctgatgctctgatctgtacagatgatttcattgccaaagttgttcaa
agatgtatgtccattcctgtcaccatgagagcaattcgtaggaaagcagaaacgattcaa
gcagatacgccggccttgtccctcattgcagagacagtagaagatatggtgaagaaaaac
cttcccccagccagcagcccagggtatggcatgaccacgggcagcaacccaatgagtggt
accaccaccccaaccaacacttttcctggggggcccatcaccactttgtttaacatgagc
ataagcatgaaagagaggcatgactcggtgggccacggcgaggacttcagcaaggtgtct
cagaacccaattctcactagtttgttacagatcacagggaatgtggggtctgccattggc
tcgagtcctacccctccccatcacacaccaccaccgttatcctcaccagcaggcaacacc
aagaaccaccccatgctcatgaacctccttaaagagaatcctccccaggatttctccact
ctgtatgggagcagccctcttgaaaggcagaactcttcctctggctctcccagaatggaa
gtgggccctggggggagtaagcaaaagaaaaaaaaatcccgcatgcctgccgacaagccc
aagcatcagactgaggatgatttccagagggagcttttttcaatggacgttgactcccag
aatcccatttttgatgtcaacatgactgcagacaccctggacacccctcatattactcca
gcacccagtcaatgcagcactcctcctactacgtacccccagcccatacctcactcgcag
cccagtattcagagaatggttcgactttctagttcagacagcattggagccgacgttact
gatatcctttcggacatagcagaggaggcttccaagctacctgccactaacgaggactgt
ccccccatcggcactcccgtgagggactcctctagttcagggcattcacaaagtgccctc
tttgacccagatgtttttcagacaaacaatagcgagaacccgtacacggatccagcagac
ctgatagcagatgctgctgtgagccccaacagtgattcttcaaaccattttttcccagat
ggggtagatttcaatcccgacttgctaaacagtcagagccaaagtggctttgcggaggag
tactttgacgagagtagtcagagtggggacacggatgatttcaagggctatgcatctcag
gctctgagtactttgggagtacaagtgttggggggcgatgggggggagaataaatttaag
gggagcaacccgtctgatacagtagattttagcatcatagcagctgcaagcaaagcgctg
gggtcctctgacatcatggagcatcacagcggaggtcagagccccttactgaacgcaggg
gatttagggaaagaaaagtctcagaaacgggtaaaagaaggcaatggttcaggaggtaac
atggcaggttctggaatagatgggaagccggggaagcgcagccggacgccctccagtgac
ggcaaaagtaaagagaagcttccaaagcggaagaagcaggagacagatgggaagtctccg
tcccacagttcgtccaacaggcctttcacaccgccagcaagcactggtgggtccaaatct
cctgggagttcaggcagatctcagactcctcccggtgtagctactcctcctattccaaaa
atcacaatccagatcccaaaaggaactgtgactgttggcaaaccgtcttctcatggccag
tatacgagtagcggctctgtcacctcctccagcagcaaaagccatcatagccattcctcc
tcctcctcctcttcttcctcttcttcaacctcaggcaaaattaaaagcagcaaatcagaa
gggtcttctggctcaaagatgagcagcagcctctactcaagccagggtggctccagttca
ggtccgtccaagagctcagttcagtccgtgggaaaacccggatcctcccccatcaccaaa
cacggcctcagcagcggttctggaagtaccaagatgaagcctcaaggaaagccatcgtca
cttatgaacccttccatgagtaaaccaaacatctctccatctcattctagaccctcagga
ggttctgacaagctcgcttctcccatgaagcctgttccaggcactcccccgtcatctaaa
gcaaagtcacctatcagttcaggttctggaggctctcatatgtctgggaccgggtcgagc
tcgagtatgaaatcgtcttcaggaatgggatcctctgggtctatgtcacagaagccgcct
ccatcatcaaattcttccacggcatcttcatcttccttctcatccagtgggtcttctatg
tcgtcatctcaaaaccagcatggaagttccaaaggcaagtctcctagcagaaataagaag
ccatctctgactgcagtcatagacaaactgaaacatggggtcgtcactagcgggcctggt
ggagatgacccaatggatggacagatggggccgagttccaattcctcgagccatgctatg
tcctccaaacacaacatggctgggggcgagttccagggcaagcgagagaagagcgacaaa
gaaaaatctaaagtctctgtttccggaggatccgttgactcttccaagaaggcttcagat
tccaaaaatgttggaagcaccggagtggccaaaatcatcatcagcaaacacgatggtggt
tctcctagcattaaagccaaagtaactttgcagaaacctggggaaggaggcggggatggc
ttgcggcctcagatggcttcttccaaaagctacggatcccctttaatcagtggatctact
ccaaaacacgaacgctgctctcccagccacagtaagtcaccagcatacactccccaaaac
atagacagcgagagcgagtcgggctcttccatagcagagaagtcctatcagaacagcccc
agctctgacgatggcatcaggccgttgcctgaatacagctcagaaaaacataagaagcac
aaaaaagagaagaaaaaagtgaaagacaaggaccgggacagagatcgggatcgggataaa
gacagagacaagaagaaatctcacggcatgaagccggagagctggtcgaaatcccccatc
tcagccgaccagcccctctccatggccagcagcgccatcctgtcggcagagcggccgtcc
cggcccagccctgagtttctgattggggaagaagatgacgatctgatggatgtggctcta
attggcaattaa
DBGET
integrated database retrieval system
