Lagopus muta (rock ptarmigan): 125684749
Help
Entry
125684749 CDS
T09141
Name
(RefSeq) keratin, type I cytoskeletal 16-like isoform X1
KO
K07604
type I keratin, acidic
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125684749
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lmut04812
]
125684749
04147 Exosome [BR:
lmut04147
]
125684749
Cytoskeleton proteins [BR:
lmut04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
125684749
Exosome [BR:
lmut04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
125684749
Exosomal proteins of other body fluids (saliva and urine)
125684749
Exosomal proteins of colorectal cancer cells
125684749
Exosomal proteins of melanoma cells
125684749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
TBCA_PH
Lzipper-MIP1
EzrA
APG6_N
CCDC39
RNA_binding
FKBP15
Motif
Other DBs
NCBI-GeneID:
125684749
NCBI-ProteinID:
XP_048783147
LinkDB
All DBs
Position
25:630793..634084
Genome browser
AA seq
444 aa
AA seq
DB search
MSCSIKRTSSTSYRSAGGGGICAGAGGRSSSASCRRYASSVIGGSSAGAACGIGYGGGMS
AGSLAGGFCGGLGGGFGGGFAGSFGAGGDALLSGNEKITMQNLNDRLASYLDKVRRLEED
NAQLELHIREWYRKQAPSASKDYSSYYQTIEQLQNQIISATVDNNRMLLDIDNSKMTADD
FRMKYENELVIRQTVESDINGLRNMLDDLTLVRSSLESELESLKDELIALKRNHEEELRQ
LQSQTGGDVSVEVNAAPGEDLTKILNDLRNEYEQIIEKNRREVEQWYEVKIEEVNRQVTS
SSQDIQTSSHQLTELKREMQNLEIELQAQLSTKDSLENSLAETESRYGCLLQQIQGQINA
VEEELGNIRCEMEGQSQEYKMLLGIKTRLEQEIAQYRALLHEGQQDLAASQGAFQGGGKS
SQSYSSSSFSQSQSGDVTGQSRVC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcagcatcaagaggacatccagcacctcgtaccgcagcgcaggcgggggaggc
atctgcgccggggccggcggcaggagctcctccgcctcgtgccggcgctacgcctcctcc
gtgatcggcggcagctccgcgggggcagcgtgcggcatcggctacggcgggggcatgagc
gccggcagcctcgccgggggcttctgcgggggcctgggaggaggcttcgggggcggcttt
gcgggaagcttcggcgccgggggggacgcgctgctgagcggcaacgagaagatcaccatg
cagaacctcaacgaccgcctggcctcctacctggacaaggtgcgaaggctggaggaggac
aacgcccagctcgagctccacatccgcgagtggtacaggaagcaagctcccagcgcctcc
aaggactacagctcctactaccagaccatcgagcagctccaaaaccagatcatttctgcc
actgtggacaacaacaggatgcttctggacatcgataacagcaagatgactgctgatgac
ttccgaatgaagtatgagaatgaactggtcatccgtcaaactgtggagtctgacatcaat
ggcttgagaaatatgctggatgacctgactctggttaggtcttcactggaatctgagctg
gagtccttgaaagatgagctgattgctctgaagagaaaccatgaggaggaattacgacag
ctgcagtctcagactggaggtgatgtgagcgtggaggtcaacgctgctcccggagaagac
ttgaccaagattctcaatgacctgagaaatgagtacgagcagatcattgagaagaaccgc
cgggaggttgagcagtggtatgaagtcaagatcgaagaagtcaatcgacaggtcacctcc
agcagccaggacatccagaccagcagccaccagctcaccgagctgaagcgcgagatgcag
aacctggagatcgagctgcaggcgcagctcagcacgaaagactcgctggaaaactccttg
gccgagacggaatctcgctacggctgcctgctgcagcaaatccaggggcagattaacgcc
gtagaggaggagctgggcaacatccgctgcgagatggagggccagagccaggagtacaag
atgctgctgggcatcaagacccgcctggagcaggagattgctcagtaccgggcgctgctc
cacgagggacagcaagaccttgctgcctcccaaggagctttccaaggaggaggaaaatcc
tcccagtcatattcttctagttccttctctcaatcccagtctggtgatgtgacagggcag
tcaagagtgtgctag
DBGET
integrated database retrieval system
