Lagopus muta (rock ptarmigan): 125684864
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Entry
125684864 CDS
T09141
Symbol
TTF2
Name
(RefSeq) transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125684864 (TTF2)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125684864 (TTF2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Zn_ribbon_GRF
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
125684864
NCBI-ProteinID:
XP_048783361
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Position
1:84007371..84027732
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AA seq
1176 aa
AA seq
DB search
MEAVVCAEHGSLCLLKTGVRDGPNKGKSFYVCGAQGSAPCGFVLPADVPPSYCLVHEGYM
VELQILVQQQHRDVYQLFYRCVNSKLNGKKWCGSVPWQDSKGTKPSQKLELQPKKAPVFN
PSGQRNPFKVIDKNCEASSWKQIKQGSGEESKAKGVEVEKGNVVESHKEKKSNSGSSTEE
HPEGLKTEKQSKGCRSDSELKGNTISESKLCLSETWKGENTHQDKEKYGGSGKESNKSER
VEKEPGGRSELFPVSFEKQSTNSKSPEKEKFTDKSLKNCGDRETRVKECIGGKNGEMKAI
PKENTTSTAVPQAASQCTLPKQGVGTAPSKTQVRPSLEQPADEVSDSGSDEVVLVYSSSN
ESEPEKSVKGLQPRGVPAETSGKSTQETSLLGATASLHMEGPRDPEALRNHLEIQLRQKK
NTLATVNIQVLPDKGQRLVKQVQDLEAALSALNISTTDTTEKRENSASSGRCGEPLPNSF
SRPGGTKLITPLPLGDHKAGSSSSSHSHPSAAALGSSEYFGRGFGMNSGVQNLYGGRMTE
DRIRAVHSATSDAINHLHKSLESCPTEQTVAEDPSGLKVPLLLHQRQALAWLLWRESQRP
CGGILADDMGLGKTLTMIALILTQKQVKTEKESKKQEMWLSRNDSTVIPSCSTLIICPAS
LIHHWKKEIDKRVGFGKLRVYLYHGPNRDKHAEVLSEHDVVVTTYSLLSKEVPTSKEEGE
FPAKDHEVESGSSHCSPLLRVAWARVILDEAHTIKNPKVQTSIAVCKLRATARWAVTGTP
IQNSLLDMYSLLRFLRCSPFDEYKVWKYQVDNNTKKGGDRLSLLTRSLLLRRTKDQLDST
GKPLVSLPQRSMQLHQLKLSAEEQSVYDVLFARSRSTLQSYLKRQEQKNEGREHAGSNPF
EKVAQDFGYSQKEFLASSQSASQVSSTAHVLSMLLRLRQCCCHLSLLKVALDQVNLTSEG
LSLSIEEQLSALTLSELQTPDSKSTVYLNGTAFNTHLFEITKESTKVSHLLAELKTIQSH
PESQKSVVVSQWTSMLKVVAVHLQRLGLKYSMVDGSVNPKQRMDVVEEFNNNPKGPQVML
VSLLAGGVGLNLTGGNHLFLLDMHWNPALEEQACDRIYRVGQQKDVVIHRFVCEGTVEEM
IVQLQTRKKGLAQQVLAGKGETSKLTLADLKTLFGI
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtggtgtgcgcggaacacggctccctctgccttctgaagaccggcgtccgc
gatggccccaacaaggggaagagcttctacgtgtgcggggctcagggctcggcgccgtgc
ggctttgtcctgccggctgatgttcctccttcgtactgtttggtccatgaggggtacatg
gtggagctgcaaatcctggttcagcagcagcacagagatgtgtaccagttgttttaccga
tgtgttaacagtaagttgaatgggaagaaatggtgtggaagtgtgccatggcaggattca
aaaggtaccaagccatcacaaaaattagaattgcagcccaagaaggcacctgtcttcaat
cccagtggccaaagaaatccattcaaggtgatagacaagaattgcgaagcatcatcctgg
aaacaaattaagcaaggcagtggagaggaaagtaaagcaaaaggagttgaagtggaaaag
ggtaatgtggtggagtcacataaagaaaagaagtccaactctggttcttccacagaggaa
catccagaagggctgaaaactgaaaaacaatccaagggatgtaggagtgattcagaactt
aagggaaacacaatatctgaatctaaactttgtctttctgagacttggaaaggagaaaat
acccatcaggataaagagaagtatggaggaagtggcaaggaatccaataaatctgaacgt
gtggagaaagagccaggtggcagatccgaactcttcccagtcagttttgaaaagcaaagt
acaaatagcaagtctccagagaaagaaaagttcacggataaaagcttaaaaaactgtggg
gatagagaaaccagagtgaaagaatgcattggtggaaagaatggagagatgaaagcaata
ccaaaagaaaacacgacttccacagcagtaccacaagcagcatcacaatgtactcttcca
aagcaaggagtagggacagcaccatccaagacacaagtcaggccaagtctggaacaacct
gctgatgaagtttctgacagtggcagtgatgaagtagtacttgtttattcttcatcaaat
gaaagtgaacctgagaaatcagttaagggtttgcaaccaagaggggttcctgcagaaaca
tcagggaagagtacccaggagacatctttgcttggagctacagcatcacttcacatggaa
ggaccccgagaccctgaggctcttcgtaaccatcttgaaatccagctgaggcagaagaag
aataccttggctacagtgaacatccaggtgctgccagataaagggcaacggttagtaaag
caagtacaggatttggaagctgcactcagtgctcttaacatttcaacaacagatactaca
gaaaaacgggagaacagtgcaagcagtggccgttgtggggaacctctgcctaactcgttc
agcagaccgggtggtacgaagttgataacaccactgcctcttggggatcataaggcaggg
tcctcttcaagctcacacagtcacccctctgctgctgccttgggttccagtgaatatttt
ggccgtggttttggaatgaactctggtgtgcagaatctgtatggaggaagaatgacagaa
gaccgaattagggccgtgcacagcgcaacaagtgatgccattaatcatcttcacaaatct
ctagaatcctgtccaacagagcagacagtagctgaggatccctctggtttgaaagttcca
ctgctgctgcaccagagacaagcacttgcatggctgctctggagagagagtcaaaggcct
tgtggaggaattctggcggatgacatgggcctggggaagactctaacaatgattgctcta
attctgacccagaagcaggtgaagacagagaaagaaagcaagaagcaagaaatgtggctg
tccagaaatgattctactgttatcccttcatgcagcactttgatcatttgtcctgcatct
ttgatccatcactggaagaaagaaattgacaaacgtgtgggctttggaaaactgagggtc
tacttgtaccatgggccaaaccgagataaacatgcagaagtgctctctgaacatgatgtt
gttgtcacaacctacagccttctatctaaggaggttcccacaagcaaagaggagggggaa
ttccctgctaaggaccatgaagtagagagtggatcatctcactgctcccctctcctcaga
gtagcttgggctcgagttatattggatgaagctcacactattaaaaatccaaaggttcaa
acctccatagctgtgtgcaagctgagagccactgccagatgggctgtcactgggacacca
atacagaacagcttattggacatgtactcccttctgaggttcctacgttgctctcctttt
gatgaatacaaagtgtggaaatatcaggtagataacaacactaagaagggaggagatagg
ctaagccttttaactaggagcctcttattacggagaactaaggaccagctggattccact
ggaaagcccttggtatctttgccacagcgtagcatgcagttgcatcagttaaaactttca
gcagaggagcagtctgtatacgatgtgctctttgcaagatccaggtcaacactacagtcc
tacctaaagcggcaagagcagaaaaatgaaggcagagagcatgctggcagtaacccattt
gagaaagttgcacaagattttgggtacagtcagaaggaatttctagcaagctctcaaagt
gcttcccaagtctcaagtactgcccacgtcttgtctatgctgttgaggctccgtcagtgc
tgctgccatctctccttactgaaagtggctctggaccaagttaatttgaccagtgaaggc
ctttctctctccattgaggaacaacttagtgccttgaccttgtctgagctccagactcct
gattcaaagtcaacagtctacctcaatggcacagcttttaatacacatctctttgaaatc
accaaggagagcaccaaggtatctcacctcttagctgaactgaaaactattcagagtcac
ccagagtctcagaaaagtgttgttgtgtctcagtggacaagcatgctgaaagttgtggct
gtgcacctccagagactagggctgaagtattcaatggtggatggctctgttaatcctaaa
cagagaatggatgtggtagaggagttcaataacaatcccaaagggcctcaggtaatgttg
gtctctttgctggctggaggtgttggcttgaacttgactggaggaaaccacctctttctc
cttgacatgcattggaatcctgcactcgaggaacaggcctgcgaccgcatttaccgagtg
gggcagcagaaggatgtggtgatacacaggtttgtctgtgaaggaacagtagaagaaatg
atcgtacaactccagaccaggaagaaaggtcttgcccaacaggtgctggcaggcaaaggg
gaaacctcaaagctcactctggctgacctcaaaactctctttggcatctaa
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