Lagopus muta (rock ptarmigan): 125684896
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Entry
125684896 CDS
T09141
Symbol
SIN3B
Name
(RefSeq) paired amphipathic helix protein Sin3b
KO
K23213
paired amphipathic helix protein Sin3b
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125684896 (SIN3B)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
125684896 (SIN3B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
125684896
NCBI-ProteinID:
XP_048783423
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Position
26:693681..707624
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AA seq
1137 aa
AA seq
DB search
MAAGGGGGGRGGSAPRWGGGGGGRAAAQEKLPVHVEDALSYLDQVKIRFGSDPATYNGFL
EIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIEIPKNGKLSIQSPLTS
QVPSEAVPSALPGSGLLLHYSQENSHNHSDCTEEFRHQLPYKEDKSQIPLESDSVEFNNA
ISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTKGRPFRGMSEEEVFTEVANLFRGQE
DLLSEFGQFLPEAKRSLFTGNGPCEVNSVQKTEHEKNLEHSKKRSRPLLLRPVSGPAKKK
MKLRGTKDLSVATVGKYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELL
QLVTPFLGKFPELFAQFKSFLGVKELSFASPLSDRSGDGMSREIDYASCKRIGSSYRALP
KTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVV
LETNLATIRVLESVQKKLSRLTQEDQEKFRLDDCLGGTSEVIQRRAIYRIYGDKAPEIIE
SLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTK
ALRSKSLLNEIESVYDEHQEQHSEGRSSSTNEPHLIFIYEDKQILEDAASLISYYVKRQP
TIQKEDQATIRQIVHHFIPELFFSQPPEHNISEESTDEDRENHQGQNLDTPELRKKHVPG
PPSSPLETKATFCDVTAAEPHNTLDDVYSLFFVNNNWYFFLRLHQTLCSRLLKIYRQAQK
QLLEYRTEKEREKLLCEGRKEKTNDPAMELRLKQPSEVELEEYYPAFLDMVRSLLDGNID
PTQYEDTLREMFTIHAYIGFTMDKLVQNIVRQLHHLVSDDICLKVVELYLNERKRGAAGG
NLSSRCVRAAKETSYQWKAERCMADENCFKVMFLQRKGQVIMTIELLDTEETQTEDPVEV
QHLANYMEQYVGVEGVPNNQNDGFLLKPVFLQRNLKKFRKWQCKQVRALRSEVKSSWKRL
IGVESACNVDCRFKLNTHKMMFIMNSEDYMYRRGALCRAKQVQPMVLLKHHQQFEEWHNR
WLEENVTMEAVDVVQDWLMGDEDEEMVPCKTTCETVNVHGVPVNRYRVQYSRRPASP
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggggcggcggcggcggccgggggggcagcgccccgcgctggggtggcggc
ggcggcggccgggccgcggcgcaggagaagctgccggtgcacgtggaggatgcgctctcc
tacctggaccaggtgaagatccgcttcggcagcgacccggccacctacaacggcttcctg
gagatcatgaaggagttcaaaagccagagcattgacacacccggagtcatccgacgcgtt
tcacagctgttccatgaacaccccgacctcattgtaggattcaatgctttcctccctctg
ggatacagaatagaaattccaaagaatgggaagttaagtatacagtcaccactgactagt
caggtgccctcagaggctgttcccagtgctctccctggcagcgggctgttgttgcattac
tcacaggagaattcacacaaccacagtgactgcaccgaggagttcaggcatcagcttcca
tacaaagaagacaaatcccaaattcccttggagtctgattctgtagagttcaataacgcc
atcagttacgtgaataagatcaaaactcgcttccttgaccacccagaaatttacagatcc
tttttagaaattcttcatacttaccagaaagaacagcttaacactaaaggtcgacccttc
cggggcatgtcagaggaagaagtgtttactgaagtagcaaatctgttcagaggacaggag
gatctgctctctgagtttggacagtttcttccagaggctaaaaggtctttgttcacagga
aatggaccatgtgaagtgaacagtgtccagaaaactgagcatgaaaagaatcttgaacac
agcaaaaagcgatccagaccgctgctgttgcgtcctgtttctggcccagcaaagaagaaa
atgaaactgagaggtaccaaagatctgtcagtagcaacagtgggaaaatatggaacgctg
caggagttttcattctttgacaaggtgcgcagagtgctcaaaagtcaggaggtctacgaa
aattttctccgctgcattgctctcttcaaccaggagttggtctctggctctgagctgctc
cagctagttacgccatttttagggaaatttccagagctgtttgcacagttcaagtccttc
cttggtgtgaaagagctttcgtttgcttctccactgagtgaccgatctggggatggaatg
agccgggaaatagattatgcttcctgcaaacgcattggatcgagttaccgtgccctccca
aaaacctaccagcagccaaagtgcagtggaagaacagccatttgcaaggaggtgttaaat
gatacctgggtttcatttccatcctggtctgaagactcaacttttgtcagctccaagaag
actccttatgaggaacagttgcaccgctgtgaggatgagcggtttgagctggatgttgtc
ttggagaccaatttagccacaatacgtgtgctggagagtgtgcagaaaaagctttctcgt
ctcactcaagaggatcaggaaaaatttcggctggatgattgcttgggaggaacatcagag
gtgatccagcgcagagccatctatcgcatctatggtgataaagcaccagagatcattgaa
agtctgaagaaaaacccagttactgcagttccagttgttcttaagagattgaaagcaaaa
gaggaggagtggcgggaggcccagcagggcttcaacaaaatttggcgtgagcagtacgag
aaagcctacctgaagtcccttgaccaccaggctgtcaacttcaaacaaaatgacaccaag
gctttgcgctccaagagcttgttgaatgaaattgagagtgtctatgatgagcatcaggag
cagcattcagaggggagaagttcatccacaaatgagcctcatcttatctttatctatgaa
gataagcagattttggaagacgcagcatctcttatcagctattacgtaaaacgtcagcct
accatccagaaggaggatcaagcaaccattcggcagatagtgcaccacttcatacccgag
ctgtttttctctcagccccctgaacacaatatttctgaagaatcaacagatgaagacaga
gaaaaccatcaggggcagaacctggatactccagagctacggaaaaagcatgtgcctggg
cctccaagcagtcctttggagacaaaagcaaccttctgtgatgttacagctgctgagccc
cataacactctggatgatgtttacagtctgttctttgtcaataataattggtatttcttc
ctccgccttcatcagactctgtgctccaggctcctaaagatttatcgtcaagcacagaag
cagctcctagaatatcggactgaaaaagagagggagaaactcctttgtgaggggagaaaa
gaaaagaccaatgatccagccatggagctcagactgaagcaaccaagtgaagtggaactg
gaggagtactaccctgcgttcctggatatggtgaggagcctgctggatgggaacattgac
ccaacgcagtacgaggacacactgagggagatgttcaccatccacgcctacattggcttt
actatggacaaactggtgcagaatattgtccgccagcttcaccatttagtgagcgatgac
atctgcttgaaggttgttgagctctacctgaacgagaggaagcgaggtgctgctggaggt
aacctgtcctctaggtgtgtccgggcagcaaaggaaaccagttatcagtggaaggctgaa
cgttgcatggcagatgagaactgtttcaaggtaatgtttctacagaggaaaggccaggtg
atcatgaccattgaactcctggatacagaagaaacccaaacagaagatccagtggaggtc
cagcaccttgctaactacatggagcagtacgttggggtagaaggagttccaaacaaccag
aatgatggcttcttactgaaaccagtttttctgcaaagaaacctaaaaaaatttcgtaag
tggcaatgtaagcaagtgagagctctgcggagtgaggtgaagagctcctggaagaggctg
attggcgttgagagcgcgtgcaacgtggactgccggttcaaactcaacacccacaaaatg
atgttcatcatgaactcggaggattacatgtacaggcggggagcgctgtgccgagccaag
caggtacagcctatggtgctgttaaagcaccaccagcagtttgaagagtggcacaacaga
tggctagaagagaatgtgaccatggaggcagtagatgttgttcaagattggctaatggga
gacgaagatgaggagatggtgccctgtaaaacaacctgtgagacagtgaatgtccatgga
gtccctgtgaacagatacagagtgcagtacagccgccgtccagcttcgccatga
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