Lagopus muta (rock ptarmigan): 125684909
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Entry
125684909 CDS
T09141
Symbol
SBNO2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125684909 (SBNO2)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125684909 (SBNO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
125684909
NCBI-ProteinID:
XP_048783436
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All DBs
Position
26:1909710..1962481
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AA seq
1437 aa
AA seq
DB search
MPSAHVAMDGGKSCPQHEQQLAADALCSIPGFCSPLAVPPMESSMLAADSWSDCYPAPFP
TSSFPSENQQYFNSSHDFYMNPISRPHFLDTNYASVDPTDFLPKNGDFPQDSSYLDELSN
NNSLFSSPADSLSDIVDAKDCLPADSLNHVPTIWDVNTSQQNQTELFSASRSFSGLNSSD
DRIPAVPNTPLLISYQSQVPAEEEDEGDEEETEELGQTETYAEYVPSKSKIGKHHPDLVV
ETSTLSSVPPPNITYSLSLPSSVADKGSLSALQLEAIIYACQQHEVLLPNGQRAGFLIGD
GAGVGKGRTVAGIIFENYLKGRKKALWFSVSNDLKYDAERDLKDIEASHIPVHALNKIRY
GDTATSEGVLFATYSALIGESQAGGQHRTRLKQILDWCRENFDGVIVFDECHKAKNASST
KMGKAVLDLQNKLPQARVVYASATGASEPKNMIYMSRLGIWGEGTPFHAFDEFLHAIEKR
GVGAMEIVAMDMKVSGMYIARQLSFTGVTFRIEEIPLDQQYKIVYDKAAKLWAEALMVFQ
QAADLIGLESRKSLWGQFWSAHQRFFKYLCIAAKVRRLVELAKEELAKDKCIVIGLQSTG
EARTREVLDENDGHLNCFVSAAEGVFLSLIQKHFPSTKRKREKGTGIKRKRKQRGRCAKA
LKGICDPVGVIKISDDSSTDSDMGLDSDFNSSPESVLETDDVIFIEHAFNGFVTESRSNF
HMLPSHKEMHGLRELEHVEKMKQDLLAKVKALGKELPLNTLDELINHFGGPEHVAEMTGR
KGRVVCRPDGSVMFESRAEQGLSIDHVNLKEKERFMSGEKLVAIISEASSSGISLQADRR
VKNQKRRVHMTLELPWSADRAIQQFGRTHRSNQVSAPEYVFLISELAGERRFASIVAKRL
ESLGALTHGDRRATESRDLSKYNFENKYGAKALDRVLSTILNYTENRVPVPKSYERGEAA
FFQEMKQGLISVGICCNQLKYGTVSVEKDCSITKFLNRILGLEVDKQNMLFQYFSDTFDY
LIEKDKKEGKYDMGILDLAPGIDEIYEESKEVFLTPGHPQDGQVVFYKISVDRGLKWEEA
YEKSLKLTGSYDGFYLSYKTRGNKYTCLLAEQGRGKNFILYKPNIGKQSQPESLDSLHKK
YRQVTPDEAKEHWESCYHFSLKKCNHAVWNRSCKLIQEGKECFQGMRLRHYYMLCGALLR
VWSRIASIMADITNTSYLQIVRLKTKEKKKQVGIKIPESCVRKVLEELKQMDENVKRKHN
RLLQAQEQSLQFSLPLHGRQQPLDLTHAAPGLSLPQHSLRQDEILDLTYSPPSDSIPDVM
NPEPSPLCFPPEPVLQPHQQHGSPFGFGHLSAFKSPDTILEGSVPLSSSLQEHQPLPHPE
PSQTLQQQEDFVQQDGNINFREILEDMLRTFNGAPQENILPQERQSVIQFSGLFPNF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgccctcagcacacgtggccatggatggggggaagagctgccctcagcatgagcagcag
ctcgcagccgatgctctctgcagcatccctggcttctgctccccactcgccgtgccgccc
atggagagttccatgttggctgccgactcgtggagtgactgctatcctgctcctttccca
acctcatctttcccaagtgaaaaccagcaatattttaattcctctcacgatttttatatg
aatcccatcagcagaccacatttcttggatacaaactatgcatctgtggaccccactgac
ttcttaccaaaaaatggtgattttcctcaggactcttcatacctcgatgagctctccaac
aataactctctcttctcatctcctgcggattccctctctgacatcgtggatgcaaaggac
tgcttgcctgctgacagcctgaaccacgtgccaaccatatgggatgtaaacacgtcacag
cagaaccaaacagagctgttctcagccagcagatcattcagtggcttaaacagttcggac
gaccgcattcctgctgtccccaacacccccctcctcataagctaccagtctcaagttcct
gcagaagaggaggatgaaggtgatgaggaagaaacagaagagttggggcaaacagaaacc
tatgcagaatacgtaccttcaaagtccaagattgggaagcaccaccctgaccttgtggtt
gaaacaagcaccctgtccagcgttcccccacccaacatcacctacagcctttctctgcca
agctccgttgctgacaaagggtcactctctgcactacagctggaagcaatcatttatgcc
tgccagcaacatgaagttttattgcccaatgggcagcgagctggcttcctcattggggac
ggcgccggagttggaaagggcaggacagttgcaggcatcatctttgaaaattatcttaaa
gggaggaaaaaagctctttggttcagcgtctccaatgatctcaagtacgatgctgagaga
gacctgaaggacattgaagcctcccacattcctgtgcatgctttgaataagattagatat
ggagacacagctacctcagaaggagtcctctttgccacttactctgctctcattggtgag
agccaggcaggcgggcagcataggacgcgcttaaaacaaattctggattggtgcagggaa
aactttgatggagttattgtatttgatgaatgccacaaagccaaaaatgccagctctact
aaaatgggcaaagcagtgttggaccttcagaacaaactgcctcaagcgagggttgtttac
gccagtgccacaggtgcctctgagccaaaaaacatgatctatatgagccgcctgggaatc
tggggggaaggcaccccattccatgcatttgatgagttcctgcacgcaattgagaagagg
ggagttggtgcaatggagatcgtggcaatggacatgaaggtcagcggaatgtacattgcc
aggcagctcagcttcactggagtgaccttcaggattgaggagatccctctggatcagcag
tacaagattgtctatgacaaagcagcaaagttgtgggcagaggccttgatggtgttccag
caggcagctgacctgatcggcttggagtctcggaaatccctgtggggtcagttctggtca
gctcaccaacgcttcttcaagtatctctgcattgctgctaaagtccggcgcctcgttgag
cttgccaaggaggagctggcaaaggacaagtgcatcgtcatcggcctgcagtccacgggg
gaggctcgcacccgagaagtcctggatgagaatgatgggcacctcaattgttttgtttct
gctgcagaaggcgtctttctatcactaattcagaagcactttccttcaaccaaaagaaag
agagaaaaaggaactggcattaaaagaaaacgcaagcagaggggccgctgcgccaaggct
ctgaagggcatctgtgaccccgtgggggtgatcaagatcagcgatgacagcagcaccgac
tctgacatggggctcgacagtgacttcaactcctccccagagtctgtgcttgagaccgac
gatgtcatcttcattgagcacgccttcaatggctttgtgaccgagagcagaagtaatttt
cacatgctgccttcacataaagagatgcatggcctgagagaactggagcatgtggaaaag
atgaagcaggacctactagcaaaagtaaaagcactgggcaaagagctacctctcaatacc
ttggatgaactgatcaatcactttgggggaccggagcacgtggctgagatgactgggcga
aagggccgggtagtttgcaggccagatggctctgtcatgtttgagtctcgtgcagagcaa
ggcctctctattgaccacgtcaacctgaaggagaaggagcgttttatgagtggggagaag
cttgtagcaataatctcggaggcctccagctcaggaatctctctccaagcagacagacgg
gtgaaaaaccagaagcgccgggtccacatgacactggagctgccctggagtgcagaccgc
gccattcagcagttcggtcggacgcatcgatcaaaccaagtttctgctccagagtatgtc
ttccttatctctgagcttgctggagagaggaggtttgcctccatcgtggcaaaacgtctg
gagagcctaggtgccttaactcacggagaccggagggccactgaatcccgagacctcagc
aagtacaactttgagaataagtatggggctaaagcactagacagagttctctccaccatc
ctcaactacacggagaacagagttcctgtgcccaagagctatgagagaggagaggctgcg
tttttccaggaaatgaagcaaggtcttatctctgtggggatctgctgcaatcagttgaag
tatggcactgtctcagtagagaaagactgctccatcaccaagttcctcaaccggatcctg
ggcctggaggtggacaagcagaacatgctgttccagtatttctctgatacctttgactat
ctgattgaaaaggacaagaaggagggcaaatatgacatgggcatcctagatttagctcca
ggaattgatgagatctacgaggaaagcaaggaggtctttctgacccctgggcacccgcag
gatgggcaggttgtgttttataagatcagtgttgacagaggactgaagtgggaggaagct
tatgagaagtcactgaaactgacgggatcttatgatgggttctacctctcctacaagaca
cgaggcaacaaatacacctgtctgctggcagagcagggccgtggcaagaacttcatcctc
tacaagccaaatattgggaagcagagccagcctgagagcttggacagtctgcacaagaag
taccggcaggtgacaccggatgaagccaaggagcactgggagagctgttatcatttctcc
ttgaagaagtgcaaccatgctgtctggaacaggagctgcaagctgatccaggaggggaaa
gaatgtttccagggcatgcgcctgcgtcactactacatgctgtgcggagccctgctgagg
gtgtggagcaggattgccagcatcatggcagacatcactaacaccagctacctgcagatc
gtccgcctcaagaccaaggagaagaagaaacaagtcgggataaagatccccgagagctgc
gttcggaaggtgctggaggagctgaagcagatggatgagaacgtgaagcggaagcacaac
cgactcctccaggcacaagagcagagcctgcagttctccctccccctgcacgggaggcag
cagcccttggacctcacgcacgcagcgcctgggctctccttaccacaacactccctgcgc
caggacgagatcctggacctgacctacagccctcccagcgacagcattcctgacgtgatg
aacccggagcccagccctctgtgcttccccccggagcctgtgctccagccccaccagcag
cacggatctccctttggcttcggccacctttctgccttcaaaagcccggacaccatcctg
gagggcagcgtgcctctgagctcttccctgcaagaacatcagcccctgcctcaccctgag
ccctcacagactctgcagcagcaagaagattttgttcaacaggatggaaatatcaatttc
agagagatcctggaggacatgctgaggacgttcaatggggcccctcaagagaacattctc
ccccaggagcgccagagcgtgatccagttcagtgggcttttcccaaacttctga
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