KEGG   Lagopus muta (rock ptarmigan): 125684975
Entry
125684975         CDS       T09141                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut03020  RNA polymerase
lmut03420  Nucleotide excision repair
lmut04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125684975 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    125684975 (POLR2E)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    125684975 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lmut03021]
    125684975 (POLR2E)
   03400 DNA repair and recombination proteins [BR:lmut03400]
    125684975 (POLR2E)
Transcription machinery [BR:lmut03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     125684975 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     125684975 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     125684975 (POLR2E)
DNA repair and recombination proteins [BR:lmut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      125684975 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 125684975
NCBI-ProteinID: XP_048783582
LinkDB
Position
26:1965218..1968172
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacgtaccggctgtggaagatccgcaagaccatcatgcagctg
tgccacgaccgcggttatctggtgacgcaggacgagctggatcagacgctggaggaattc
aaggcgcagttcggggacaaacccagcgagggccgcccgcgccgcaccgacctgaccgtg
ctggtggctcacaacgacgatccgaccgaccagatgttcgttttctttcccgaggagccc
aaagtcggcatcaaaaccatcaagatgtactgccagcgcatgcaggaggagaacatcacg
cgtgcgctgatcgtggtgcagcagggaatgaccccctcggccaagcagtccctggtcgat
atggctcccaaatacattctggagcagtttctgcagcaggagctcctgatcaacatcact
gaacatgagctggtcccagagcacgttgtcatgacaaaagaagaagtaaccgagctgctg
gccagatataagctgagggagaaccaactccccaggatccaggctggggaccccgtggcc
cgatactttgggataaagagaggccaggtggtgaagatcatcagaccgagtgagactgcg
ggccgctacatcacctacaggctggtgcagtga

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