Lagopus muta (rock ptarmigan): 125685068
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Entry
125685068 CDS
T09141
Symbol
PDGFB
Name
(RefSeq) platelet-derived growth factor subunit B
KO
K17386
platelet-derived growth factor subunit B
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04010
MAPK signaling pathway
lmut04020
Calcium signaling pathway
lmut04510
Focal adhesion
lmut04540
Gap junction
lmut04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125685068 (PDGFB)
04020 Calcium signaling pathway
125685068 (PDGFB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125685068 (PDGFB)
04540 Gap junction
125685068 (PDGFB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125685068 (PDGFB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lmut04052
]
125685068 (PDGFB)
00536 Glycosaminoglycan binding proteins [BR:
lmut00536
]
125685068 (PDGFB)
Cytokines and neuropeptides [BR:
lmut04052
]
Cytokines
Growth factors (RTK binding)
125685068 (PDGFB)
Glycosaminoglycan binding proteins [BR:
lmut00536
]
Heparan sulfate / Heparin
Growth factors/receptors
125685068 (PDGFB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
125685068
NCBI-ProteinID:
XP_048783781
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All DBs
Position
1:49916787..49933721
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AA seq
251 aa
AA seq
DB search
MCPQPAGPEAGMNFGVVFAVILSLPLARLEGDPIPEDIYEILGGSSVRSISDLQRALRID
SVEQDSSSLDLNATQPSQNHASLARERRSLDALAAAEPAVLAECKTRTVVFEISRDMVDS
TNANFVVWPPCVEVQRCSGCCNNRNVQCRPMQIRVRHVQVNKIEFVQKKPVFKKVVVPLE
DHVQCRCEAVSRPPPRSSRPAPREQRRLSPSFTTAAISQRKRVRRPLAQKRKHKKYKHVN
DKKVLKEILIA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtgcccgcagccggcggggcctgaagccggcatgaatttcggcgtggtcttcgccgtc
atcctgtccctgcccctggcccgcctggagggggaccccatacctgaagatatttatgag
attttgggtggcagctccgtgcgctccatcagtgacctccagcgtgccctgcggatagac
tccgtagagcaagacagctctagcctggacctgaatgcaactcagcccagccaaaaccat
gcgtccctggctcgagagaggcgaagccttgatgctctggcagcagcagagccagctgtc
ctcgccgagtgcaagacgcggacggtggtctttgagatctcccgcgacatggtggacagc
accaacgccaacttcgtggtgtggccgccctgcgtggaggtgcagcggtgctccggctgc
tgcaacaaccgcaacgtgcagtgccgccccatgcagattcgcgtccggcacgtccaggtg
aacaagatcgagtttgtccagaagaagccagtattcaaaaaagtcgttgtgcctttggag
gaccatgtgcagtgccggtgtgaagcagtatcccggccgccccccaggagcagccggcca
gcaccccgtgagcagagacgcttgtcgccgtcgttcaccacagccgccatctcccagagg
aagcgggtacgccggccgctagcacagaagagaaaacacaagaaatacaagcatgtcaac
gataagaaagtgctgaaagaaatcctcatagcatag
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