Lagopus muta (rock ptarmigan): 125685116
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Entry
125685116 CDS
T09141
Symbol
TNFSF11
Name
(RefSeq) tumor necrosis factor ligand superfamily member 11 isoform X1
KO
K05473
tumor necrosis factor ligand superfamily member 11
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125685116 (TNFSF11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lmut04052
]
125685116 (TNFSF11)
04090 CD molecules [BR:
lmut04090
]
125685116 (TNFSF11)
Cytokines and neuropeptides [BR:
lmut04052
]
Cytokines
Tumor necrosis fators
125685116 (TNFSF11)
CD molecules [BR:
lmut04090
]
Proteins
125685116 (TNFSF11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
125685116
NCBI-ProteinID:
XP_048783883
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All DBs
Position
1:164615072..164636684
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AA seq
318 aa
AA seq
DB search
MRRASRDYTKYLRGSEEVGSGTAHESAPPPPPAPPLPPHPHPPPASRSLLAALVLLGLGQ
VVCSVALFLYFRAQMDPSRISKEDAHCVRMLFRSQESIDMQDMPFENQEVKLMPESCRRM
KQALQRAVQKEVQRILGKEPPRPEKAAMEAIGMELYRRNKPEKQPFAHLIIDDKNIPTGT
RKVNLTSWHHDKGQANLSNMTFSDGKLIVNQDGFYYLYANICFRHHETSGNLTKRGLQLM
VYMTKTNLKIRRSDVLMKGGSTKYWSGNSEFHFYSVNIGGFLKLKTGDMISIQVSNPLLL
DSSQEATYFGAFKVRDLD
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgcgccagccgagactacaccaaatacttgcgcggctccgaggaggtgggcagc
ggcaccgcccacgagagcgccccgccgccgccgccagcgcctccgctgccgccacacccg
cacccgccgcccgcctcgcgctcgcttctggccgccctcgtcctgttggggctgggacag
gtggtctgcagcgtcgccctcttcctctatttccgagctcagatggaccctagtagaatt
tcaaaagaagatgcacactgtgtcagaatgcttttcagatctcaagagagtatagacatg
caagacatgccctttgaaaatcaagaggtaaagttaatgccagaatcatgcagaaggatg
aagcaggctctccaaagagctgtgcagaaggaagtccagcgtattttgggaaaagagcca
ccaagaccagaaaaagctgcaatggaggcaataggaatggaactgtacaggagaaataag
ccagagaagcaaccttttgcccatctcattattgatgataagaatattccaactggaact
cgcaaagtgaaccttacatcttggcatcatgacaaaggccaggcaaacttatcaaatatg
acgttcagtgatgggaagctgattgttaatcaagatggattttactacctttatgccaac
atttgttttaggcatcatgaaacttcaggaaatctgactaaaagagggcttcagctgatg
gtgtacatgactaagacaaaccttaaaataaggcgctctgatgtgttgatgaagggagga
agcaccaaatactggtcagggaattcagaatttcatttttattctgtaaacataggagga
tttttaaaattaaaaactggcgatatgataagtatccaggtatcaaacccattgttactg
gattcatcacaagaagcaacttactttggggcatttaaagtaagggatttagactga
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