Lagopus muta (rock ptarmigan): 125685127
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Entry
125685127 CDS
T09141
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04145
Phagosome
lmut04510
Focal adhesion
lmut04512
ECM-receptor interaction
lmut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125685127
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125685127
09144 Cellular community - eukaryotes
04510 Focal adhesion
125685127
09142 Cell motility
04820 Cytoskeleton in muscle cells
125685127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125685127
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmut04147
]
125685127
00536 Glycosaminoglycan binding proteins [BR:
lmut00536
]
125685127
Membrane trafficking [BR:
lmut04131
]
Endocytosis
Phagocytosis
Opsonins
125685127
Exosome [BR:
lmut04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125685127
Exosomal proteins of colorectal cancer cells
125685127
Exosomal proteins of bladder cancer cells
125685127
Glycosaminoglycan binding proteins [BR:
lmut00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125685127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF_MSP1_1
DUF7630
EGF
Motif
Other DBs
NCBI-GeneID:
125685127
NCBI-ProteinID:
XP_048783900
LinkDB
All DBs
Position
26:complement(1160607..1200575)
Genome browser
AA seq
761 aa
AA seq
DB search
MISALAFVFLLCLSCPFSSCQQRRAGIEVGPEMLEEMRETNRVLMEVRDLLKQQIKEITF
LKNTVMECDACGIHTEATGPLITVTQFNRCVPNPCFPGVPCTETSTGFRCGPCPPGYSGN
GSQCTDINECSANPCFPKVQCINTAPGFRCDPCPPGFTGQTVEGVGLAYARANKQVCTDI
NECETGAARNCVPNSICINTRGSYKCGACKPGFVGDQITGCKSQTGRLCPNGEVSPCHEK
AQCIVERDGSISCACLVGWAGNGYICGKDTDIDGVPDEKLRCSDKKCRKDNCMTVPNSGQ
EDADRDGIGDACDDDADGDGILNAEDNCVYTRNADQRNADKDNFGDACDNCRQVKNDDQR
DIDGDGKGDECDDDIDGDGIKNPTDNCKRVPNPDQKDTDGDGVGDMCDSCPTVSNPDQKD
TDHDLVGDVCDTNQDSDGDGHQDTRDNCPSVPNSSQVDTDNDGLGDECDDDDDNDGIPDE
KPPGPDNCRLVPNPGQEDSDGDGVGNLCEEDFDRDMVIDRIDVCPENAEVTLTDFRAFQT
VVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDY
AGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSKTGPGEYLRNSLWH
TGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQHRPQVGYIRARFYEGPEVVADTGVVLDTT
MRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYETFKVQQD
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagctctagcctttgtttttctcctctgcctctcctgtcctttttcatcatgt
cagcagagaagagcaggaattgaagttgggcctgaaatgctggaagagatgagagaaact
aaccgtgtgttaatggaagttcgagacttgttgaaacagcagattaaggagataacattc
ctgaagaacacagtcatggagtgtgatgcctgtggcatacacactgaagcgacaggccct
ctcatcactgtgacacagtttaacagatgtgtcccaaacccctgcttccctggagtgccc
tgcactgagaccagcactggcttccgctgcggaccctgtcccccaggttactcagggaat
gggtcccagtgcacagacatcaatgagtgcagtgcaaacccctgcttcccaaaggtccag
tgcattaacactgctcctggcttccgctgtgatccttgccctcctggcttcactgggcaa
acggtcgaaggagttggactagcttatgccagggccaacaaacaggtttgcactgacatc
aatgaatgtgagacaggtgctgccagaaattgcgtcccgaattctatctgtatcaataca
cggggatcctacaagtgcggagcttgtaaacctggctttgttggggatcaaatcaccggc
tgcaagagccagacagggagactctgccctaacggcgaagtcagcccgtgccacgagaaa
gcacagtgcatcgtggagcgggacggctccatctcctgcgcgtgccttgtggggtgggca
gggaatggctacatctgtgggaaggatacagacattgatggagtccctgatgaaaagctg
cgctgctctgacaagaagtgccgcaaggataactgcatgactgtccccaactctggccag
gaggatgcagacagggacggaattggagatgcctgtgatgatgatgctgatggagatggg
atattaaatgccgaggacaactgcgtgtacacccgcaatgcagaccagcgcaatgcagac
aaggataactttggggatgcctgtgacaactgtcgccaagtgaagaacgatgaccaacgg
gacattgatggcgatgggaaaggagatgagtgtgacgatgacatagatggagatggaatc
aaaaatccaacggacaactgtaaaagagttcctaaccctgatcaaaaagacactgatggt
gatggagtaggagatatgtgcgacagctgcccgactgtcagtaacccagaccagaaagat
actgatcatgatctcgtgggagatgtctgtgacaccaaccaggacagcgatggcgatggc
caccaagacacaagagataactgcccctcagtgcctaacagctcccaggtggacacagac
aatgatggactaggagatgaatgtgatgatgatgatgacaatgatgggattccagatgag
aaacccccaggccctgacaactgtcggcttgtccctaaccctggccaagaagattcagat
ggtgatggtgtgggaaatctttgtgaagaggactttgacagagacatggtgattgacaga
attgatgtgtgcccagagaacgcagaagtgacgctaactgacttcagggctttccagaca
gtcgtgctggaccctgagggtgatgcacagattgaccccaactggattgtccttaaccag
ggcatggaaattgtccaaaccatgaacagcgatcctggcttggctgtaggttacacagca
ttcaatggagtggactttgagggcacattccatgtcaacactgccacagatgacgattat
gctggcttcatatttggctaccaggacagttccagcttctacgtggtcatgtggaagcag
atggagcagacatactggcaggcaaaccccttccgagcagtcgcagaacctggtattcag
ctgaaggcagtgaagtccaaaacaggcccaggtgagtatctgcgcaactccctctggcac
actggggacaccacagaccaagtcaaactgctgtggaaggacccccgcaactccggctgg
aaggacaagacgtcgtaccgctggttcctgcaacaccggcctcaggttggatacatcaga
gctcgcttctatgaaggccccgaggttgtagcagacactggagttgtccttgacacaact
atgcgaggagggcgcctgggagtcttctgcttctcccaggagaacattatttggtcaaac
ctgcgctaccgctgcaacgataccattccagaagactatgaaacatttaaagttcagcaa
gactaa
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