Lagopus muta (rock ptarmigan): 125685153
Help
Entry
125685153 CDS
T09141
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125685153 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125685153 (LSM1)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125685153 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
125685153 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
125685153
NCBI-ProteinID:
XP_048783951
LinkDB
All DBs
Position
27:2370332..2371715
Genome browser
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIQDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTLLQQVSIEEILEEQRVELQAKQESEKLKVQALKER
GLVVPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgccgggtacggccagcctcatccaggacatcgacaagaaacacctggtc
ctgctgagggacggtcggacgctgatcggcttcctacgcagcatcgatcagttcgcaaat
ctggtgctgcatcaaaccgtggagcgcattcacgtgggcaagaagtatggagacatccct
cgagggatctttgtcgtgagaggagagaacgtggtgctgctgggggagatcgacctggaa
aaagagagcgacacgctgctgcagcaggtatccatcgaggagatcctggaggagcagcga
gtggagctgcaggccaagcaggaatcagagaagctgaaggtgcaggcgttgaaggaacgt
ggcctggtggtgcccagggctgacacgttggatgagtactga
DBGET
integrated database retrieval system
