Lagopus muta (rock ptarmigan): 125685214
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Entry
125685214 CDS
T09141
Symbol
PCNA
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03030
DNA replication
lmut03410
Base excision repair
lmut03420
Nucleotide excision repair
lmut03430
Mismatch repair
lmut04110
Cell cycle
lmut04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125685214 (PCNA)
03410 Base excision repair
125685214 (PCNA)
03420 Nucleotide excision repair
125685214 (PCNA)
03430 Mismatch repair
125685214 (PCNA)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125685214 (PCNA)
09144 Cellular community - eukaryotes
04530 Tight junction
125685214 (PCNA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmut03032
]
125685214 (PCNA)
03400 DNA repair and recombination proteins [BR:
lmut03400
]
125685214 (PCNA)
DNA replication proteins [BR:
lmut03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
125685214 (PCNA)
DNA repair and recombination proteins [BR:
lmut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
125685214 (PCNA)
MMR (mismatch excision repair)
Other MMR factors
125685214 (PCNA)
TLS (translesion DNA synthesis) factors
Other TLS factors
125685214 (PCNA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
FmdE
Motif
Other DBs
NCBI-GeneID:
125685214
NCBI-ProteinID:
XP_048784070
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All DBs
Position
27:2786916..2790024
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AA seq
262 aa
AA seq
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MFEARLVQGSVLKRVLEALKDLITEACWDLGSGGISLQSMDSSHVSLVQLTLRSEGFDTY
RCDRNIAMGVNLNSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSAEFARICRDLSHIGDAVVISCAKDGVKFSANGELGNGNI
KLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSPTVTLSMSADVPLVVEYK
IADMGHLKYYLAPKIEDQQEGS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggcgcggcttgtgcagggctcggtgctcaagcgggtgctggaggccctgaag
gacctcatcaccgaggcgtgctgggacctaggatcaggcggcatcagcctgcagagcatg
gactcctcgcacgtttctttggtgcagctcacgctgcgttctgagggcttcgacacctac
cgctgcgaccgtaacatcgccatgggcgtcaacctcaacagcatgtctaaaatactgaag
tgtgctggaaatgaagacatcataactcttagggcagaagacaatgcggatacgttggct
ctcgtgtttgaagcaccaaatcaggaaaaggtttctgattatgagatgaagcttatggat
ctcgatgtggaacagcttggaattccagaacaagaatacagttgtgttgtgaaaatgcct
tctgctgaatttgcacgcatctgtagagacctcagccacattggtgatgctgttgtcatc
tcctgtgcaaaagacggtgtgaaattttcagctaatggagagttaggaaatggaaacatc
aagctgtcacagaccagtaacgtggacaaagaggaagaagctgttacaatagaaatgaat
gagccagtccagttgacttttgctctgaggtatttgaacttttttaccaaagccaccccc
ctgtcacctacagtaacactcagcatgtctgcagatgttcctctggttgtggagtacaag
atcgctgatatgggacatttaaaatactacctggctccaaagattgaagaccagcaagaa
ggctcttaa
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