Lagopus muta (rock ptarmigan): 125685343
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Entry
125685343 CDS
T09141
Symbol
POLB
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125685343 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmut03400
]
125685343 (POLB)
Enzymes [BR:
lmut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125685343 (POLB)
DNA repair and recombination proteins [BR:
lmut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
125685343 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
125685343 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
HHH_5
HHH_2
Cdd1
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
125685343
NCBI-ProteinID:
XP_048784285
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All DBs
Position
27:1866925..1874897
Genome browser
AA seq
335 aa
AA seq
DB search
MSKRKAPQESLNQGITDFLMELANYERNVNRAIHKYNAYRKAASVISRYPSRIQNGAEAK
KLDGVGAKIAEKIDEFLSTGKLRKLEKIRQDDTSASINFLTRVTGIGPAAARKFVEEGIK
TLEDLRKNEHKLTHHQRIGLKYFEDFEKRIPREEMLQMQDIVLKEVKNVDPNYIATVCGS
FRRGAESSGDMDVLLTHPTFTSESSKQSKLLHQVVEQLEKVHFVTDVLSKGDTKFMGVCQ
LPDKDDGTSYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEMGFTINEYTIRP
LGVTGVAGEALPVECEKDIFDYIQWKYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcggaaggcgccgcaggagagcctcaaccagggcatcacggacttcctcatg
gagctagcgaattacgagcgcaacgtgaaccgagccatccacaagtacaacgcatacagg
aaagcggcctctgtcatctcccggtaccccagcagaatacagaatggagcggaagctaag
aagctggatggagtaggtgctaaaatagctgagaagatagatgagtttttatctactgga
aagcttcgcaaattggaaaagattcgacaagatgatacaagtgcttccatcaacttcctg
acacgagttactggcattggtcctgctgctgctaggaagtttgttgaggaaggaatcaag
actttagaagatctaagaaaaaatgagcacaagctgacccatcaccagcgaattgggttg
aaatattttgaagattttgagaaaagaatcccgagggaagaaatgctgcaaatgcaggac
attgtgctgaaagaggtaaagaacgtggacccaaattatattgctacagtctgtggcagt
tttaggcgaggtgcagagtcgagtggtgacatggatgttctcttaacccatccgactttc
acatctgaatcatccaaacagtcaaagcttctgcatcaagttgtagaacaactggaaaaa
gtccactttgtcactgatgtgctgtctaaaggtgacaccaaattcatgggtgtctgccag
ctgccagataaagatgatggaacatcgtatccacacaggagaattgatattcggcttatc
cctaaggatcagtattactgtggtgtgctgtatttcacaggcagtgatatattcaataag
aacatgagggcccacgctctggaaatgggcttcacaatcaatgagtatacaatccgtccc
ttgggtgtcactggagtcgctggggaggccctaccagtagaatgtgagaaggacatcttt
gactacatccagtggaaataccgagagccaaaggatcggagtgaataa
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integrated database retrieval system
